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The map label for this gene is ybbM [H]

Identifier: 119357120

GI number: 119357120

Start: 1501162

End: 1501941

Strand: Reverse

Name: ybbM [H]

Synonym: Cpha266_1309

Alternate gene names: 119357120

Gene position: 1501941-1501162 (Counterclockwise)

Preceding gene: 119357121

Following gene: 119357118

Centisome position: 47.93

GC content: 50.26

Gene sequence:

>780_bases
ATGGGAGTTATTGAGATTTCAACCGGGCAGCTTCTGCTGGCGCTTGTTTTTGTTTTTATCGCCCAGGCGGCATCGCTTGT
CTGGCATCTCGGTTTGAATCGGGATATTCTGGTCGGAACAGTGCGAACGTTTGCGCAGCTTTTTCTTATGGGCTATGCGC
TGACGTTTGTCTTGCAGTCAGAGAGCGTTTGGCTGACAATCGGGGTTTTTCTTCTCATGGTAATATCAGCCGTCTTTATC
ATAAAAGGGCGGGTCAGGGAAAAGCAGATACCCTATATTCTGCCAACCTTTATAACCATGCTGTTGAGCTATTTTGTAAC
CGCCGTGTTTGTATCGGGGCTTGTTATAGGCAGTTCGCCCTGGTGGGAGCCCCGATATTTTCTGCCAGCCGGAGGGATGA
TTATCGGGAACTCGATGTCGGCACTTGCCATTGCCCTTGAACGACTTTTCAGCGAGATACGCAAGGGAAAAGATCTTGTC
GAGATGAAACTTTCGCTTGGCGCCAATTACCGTGAAGCAAGTGCCGATATTTTCAAAAACGCGGTTACCGCCGGTATGAT
TCCCTCCATCAATGCCATGATGGGCGTCGGGCTGGTATTTATTCCCGGCATGATGTCCGGCCAGATTCTTGCCGGCGTTG
ACCCTCTGCTGGCGATTCGATACCAGATTGTCGTCATGCTTATGCTTGTCGGCTCAACGGCAGTTTCGTCAGTTGCGGTT
ATGCTTATTGCCAGAAAGCGATGCTTCGGTCCTGGCGAGAATGTGCGCCTTTTTTCCTGA

Upstream 100 bases:

>100_bases
GGAAAACAATCATCGCGGTAACGCATAGCGACGTTGCCATAGAGAGTCCCCGCCTGCTTACGGGTCTGCTTGAAAATAAA
AATCTTGTCCTGAAGAAATA

Downstream 100 bases:

>100_bases
ACGTTTTCTGGTAACCAAAAGCGTGATTATTCCCGCAATCATCATCACGAAACAGAGAATCTGCCCCATTGAAAAGTTCA
GAAAAATAAACCCGAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGVIEISTGQLLLALVFVFIAQAASLVWHLGLNRDILVGTVRTFAQLFLMGYALTFVLQSESVWLTIGVFLLMVISAVFI
IKGRVREKQIPYILPTFITMLLSYFVTAVFVSGLVIGSSPWWEPRYFLPAGGMIIGNSMSALAIALERLFSEIRKGKDLV
EMKLSLGANYREASADIFKNAVTAGMIPSINAMMGVGLVFIPGMMSGQILAGVDPLLAIRYQIVVMLMLVGSTAVSSVAV
MLIARKRCFGPGENVRLFS

Sequences:

>Translated_259_residues
MGVIEISTGQLLLALVFVFIAQAASLVWHLGLNRDILVGTVRTFAQLFLMGYALTFVLQSESVWLTIGVFLLMVISAVFI
IKGRVREKQIPYILPTFITMLLSYFVTAVFVSGLVIGSSPWWEPRYFLPAGGMIIGNSMSALAIALERLFSEIRKGKDLV
EMKLSLGANYREASADIFKNAVTAGMIPSINAMMGVGLVFIPGMMSGQILAGVDPLLAIRYQIVVMLMLVGSTAVSSVAV
MLIARKRCFGPGENVRLFS
>Mature_258_residues
GVIEISTGQLLLALVFVFIAQAASLVWHLGLNRDILVGTVRTFAQLFLMGYALTFVLQSESVWLTIGVFLLMVISAVFII
KGRVREKQIPYILPTFITMLLSYFVTAVFVSGLVIGSSPWWEPRYFLPAGGMIIGNSMSALAIALERLFSEIRKGKDLVE
MKLSLGANYREASADIFKNAVTAGMIPSINAMMGVGLVFIPGMMSGQILAGVDPLLAIRYQIVVMLMLVGSTAVSSVAVM
LIARKRCFGPGENVRLFS

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=248, Percent_Identity=33.4677419354839, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28193; Mature: 28062

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVIEISTGQLLLALVFVFIAQAASLVWHLGLNRDILVGTVRTFAQLFLMGYALTFVLQS
CCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ESVWLTIGVFLLMVISAVFIIKGRVREKQIPYILPTFITMLLSYFVTAVFVSGLVIGSSP
CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WWEPRYFLPAGGMIIGNSMSALAIALERLFSEIRKGKDLVEMKLSLGANYREASADIFKN
CCCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
AVTAGMIPSINAMMGVGLVFIPGMMSGQILAGVDPLLAIRYQIVVMLMLVGSTAVSSVAV
HHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLIARKRCFGPGENVRLFS
HHHHHHHCCCCCCCCEECC
>Mature Secondary Structure 
GVIEISTGQLLLALVFVFIAQAASLVWHLGLNRDILVGTVRTFAQLFLMGYALTFVLQS
CEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ESVWLTIGVFLLMVISAVFIIKGRVREKQIPYILPTFITMLLSYFVTAVFVSGLVIGSSP
CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WWEPRYFLPAGGMIIGNSMSALAIALERLFSEIRKGKDLVEMKLSLGANYREASADIFKN
CCCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
AVTAGMIPSINAMMGVGLVFIPGMMSGQILAGVDPLLAIRYQIVVMLMLVGSTAVSSVAV
HHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MLIARKRCFGPGENVRLFS
HHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]