| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is mutA [H]
Identifier: 119356982
GI number: 119356982
Start: 1312879
End: 1314648
Strand: Reverse
Name: mutA [H]
Synonym: Cpha266_1165
Alternate gene names: 119356982
Gene position: 1314648-1312879 (Counterclockwise)
Preceding gene: 119356983
Following gene: 119356981
Centisome position: 41.95
GC content: 50.62
Gene sequence:
>1770_bases ATGAGCACTCCTGAACCTGACACTCTCTTTGCAGAGTTTTCACCAGTCAGCAAAGCCGAGTGGAAAGCAAAGGCATCTGC CGAGCTCGGAGAAAAACCATTTAACGCTATAGTATGGAAAACAGAGAACGGATTTGCTCTCGAACCATGGTACTCATCCG ATGAGAGCAGCGACCTGCCGGTTCCTGTTGCGCCCGATCCGGAAACATGGAGGATGTGCAGAAAAATCCCTGTAACCGAT ACCGGAAACGCAAACGAAAACGCCCGCCAGAGCCTTCGGGAAGGCGCAACCGCACTGGAGTTCGTGCTTTCAGGAAACGC ATACTGTACGCATGAACAACTTCTTCTGCTCTTACAGGATATTGACACCACGCTCGTTCCCGTTTACTTTTCCGGAGAGT TCTCCCCCACTCTGCTTCTCGATAATCTTCTTTCAATTACCGCCTTCAAAAACAACTCGGGAGGCTTTCTTGTCGAAAAG CATGATGAGTATGAAGCTGTTGAAGCAGCTCTCGTCAATCATGGGTCGCTGCTTGAAAACTATCGCACCCTTTCGGTCTC TGCCGTCAATGATCATGAAAACGGAGCTTCGGCAAGCGAAGAAATTGCTTTTCTGCTTGCAGGAGTAAGCGATTCGCTCT ATCGCCTGCAAGCAGCAGGCATTCCTGCTGAAACCGCTGCCCGAAAAATCGAAATCGTTCTGGCCGTCGGGCCAAGCCAT TTCACGGAACTTGCAAAAATACGGGCAGTGCGATTTCTCCTTCAGCATATCCTGAAAGCATACGGCGCTCCGACTGACCA TCTGCCTCGCATTTTCGCCCGAACTTCAGAGAGAAACCTTTCGCGTCTCGATCCCTTCACAAACCTGCTCCGCCAAACCA CCGAGGCTGTTTCCGCGATTTTCGGCGGATGCCAGACTCTGCAGATTTCGCCATTCGATAACGGACTATCCGTCTCTCAT ACCATGGCCGAACGGGTCTCCGGAAACATCCATCTCCTGCTGCAGCGCGAAGCGGGACTTGATCGGGTGTCCGATCCGGC CAGAGGTTCCTGTTACATCGAACAGATGACCAGGGAACTCTCCCGATCCGCATGGAGTCTTTTCAGGGATATCGAAACTG CCGGCGGCCTGAACAATGCGCGCAAAAGCGGCATGATTGATTCGTTGATCCGGAAAACGTCCGAAAAGAGAGTCGCATCC ATCAACACCCGAAGCAAAACAATAGTAGGGGTAAACCGTTATCCTGGAAACCTTACGATTCAGCAGGAGGAGAACCTTTC CGAAATAAGGACTATTCTGGAAAAGAGAACAGAGGGTAATGAAAGCGGAGCTTTCGAGCTGCTCCGAATAAACACCATCA TGAACAAAACGAAAACCGGGCATCATCCGGCAGTTTTTTTCTGGATGCAGGGCGATACCGCAACAAGCTTCCGACAGGCT GCATTTGCTGAAGATTTTTTCAGATGCGGCGGTTTCGATATAGCCGGAAGCGCTCAGCTTGTGCCTGAAGAGTCATCATT TCAAACCGTGCTCGACCATAAACCTGCTGTTCTGGTGCTCTGCATTGCTGAAAAAGATCCATGTTCCTCAGCAGAAACGA TCGCCCGGAACCTTCACACTCTTGACCCTGAGCTTCTCATGGTCATGGCAGGAAAACCCCCGCAAGATCCGGAACCGCTT TTCCGTGCCGGCATAGACAGCTTTATTCATACAGGAGTAAACATCATCGACCATTTGACCATGTACCAACATAAAACCGG AGTACAATGA
Upstream 100 bases:
>100_bases TTACCCGGCACGATAAAAAATGATATTTCAGCCATAATCACACAGAGCAGATCAAAAACGGCTTCACGCTTCTGCTGCAT GAATCACTCAAAAACCAACC
Downstream 100 bases:
>100_bases GACCGGATTTTTCAGGCATCGATATCTTTTCCGCCTTTTCAGCCAATAAGGATAATCCCATAGAAGTGCCCCGGCACTTC ACCTCCGCTGAGGGAATCGA
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MSTPEPDTLFAEFSPVSKAEWKAKASAELGEKPFNAIVWKTENGFALEPWYSSDESSDLPVPVAPDPETWRMCRKIPVTD TGNANENARQSLREGATALEFVLSGNAYCTHEQLLLLLQDIDTTLVPVYFSGEFSPTLLLDNLLSITAFKNNSGGFLVEK HDEYEAVEAALVNHGSLLENYRTLSVSAVNDHENGASASEEIAFLLAGVSDSLYRLQAAGIPAETAARKIEIVLAVGPSH FTELAKIRAVRFLLQHILKAYGAPTDHLPRIFARTSERNLSRLDPFTNLLRQTTEAVSAIFGGCQTLQISPFDNGLSVSH TMAERVSGNIHLLLQREAGLDRVSDPARGSCYIEQMTRELSRSAWSLFRDIETAGGLNNARKSGMIDSLIRKTSEKRVAS INTRSKTIVGVNRYPGNLTIQQEENLSEIRTILEKRTEGNESGAFELLRINTIMNKTKTGHHPAVFFWMQGDTATSFRQA AFAEDFFRCGGFDIAGSAQLVPEESSFQTVLDHKPAVLVLCIAEKDPCSSAETIARNLHTLDPELLMVMAGKPPQDPEPL FRAGIDSFIHTGVNIIDHLTMYQHKTGVQ
Sequences:
>Translated_589_residues MSTPEPDTLFAEFSPVSKAEWKAKASAELGEKPFNAIVWKTENGFALEPWYSSDESSDLPVPVAPDPETWRMCRKIPVTD TGNANENARQSLREGATALEFVLSGNAYCTHEQLLLLLQDIDTTLVPVYFSGEFSPTLLLDNLLSITAFKNNSGGFLVEK HDEYEAVEAALVNHGSLLENYRTLSVSAVNDHENGASASEEIAFLLAGVSDSLYRLQAAGIPAETAARKIEIVLAVGPSH FTELAKIRAVRFLLQHILKAYGAPTDHLPRIFARTSERNLSRLDPFTNLLRQTTEAVSAIFGGCQTLQISPFDNGLSVSH TMAERVSGNIHLLLQREAGLDRVSDPARGSCYIEQMTRELSRSAWSLFRDIETAGGLNNARKSGMIDSLIRKTSEKRVAS INTRSKTIVGVNRYPGNLTIQQEENLSEIRTILEKRTEGNESGAFELLRINTIMNKTKTGHHPAVFFWMQGDTATSFRQA AFAEDFFRCGGFDIAGSAQLVPEESSFQTVLDHKPAVLVLCIAEKDPCSSAETIARNLHTLDPELLMVMAGKPPQDPEPL FRAGIDSFIHTGVNIIDHLTMYQHKTGVQ >Mature_588_residues STPEPDTLFAEFSPVSKAEWKAKASAELGEKPFNAIVWKTENGFALEPWYSSDESSDLPVPVAPDPETWRMCRKIPVTDT GNANENARQSLREGATALEFVLSGNAYCTHEQLLLLLQDIDTTLVPVYFSGEFSPTLLLDNLLSITAFKNNSGGFLVEKH DEYEAVEAALVNHGSLLENYRTLSVSAVNDHENGASASEEIAFLLAGVSDSLYRLQAAGIPAETAARKIEIVLAVGPSHF TELAKIRAVRFLLQHILKAYGAPTDHLPRIFARTSERNLSRLDPFTNLLRQTTEAVSAIFGGCQTLQISPFDNGLSVSHT MAERVSGNIHLLLQREAGLDRVSDPARGSCYIEQMTRELSRSAWSLFRDIETAGGLNNARKSGMIDSLIRKTSEKRVASI NTRSKTIVGVNRYPGNLTIQQEENLSEIRTILEKRTEGNESGAFELLRINTIMNKTKTGHHPAVFFWMQGDTATSFRQAA FAEDFFRCGGFDIAGSAQLVPEESSFQTVLDHKPAVLVLCIAEKDPCSSAETIARNLHTLDPELLMVMAGKPPQDPEPLF RAGIDSFIHTGVNIIDHLTMYQHKTGVQ
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=455, Percent_Identity=24.1758241758242, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1789284, Length=258, Percent_Identity=29.4573643410853, Blast_Score=135, Evalue=5e-33, Organism=Caenorhabditis elegans, GI25144500, Length=240, Percent_Identity=30, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 64881; Mature: 64750
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPEPDTLFAEFSPVSKAEWKAKASAELGEKPFNAIVWKTENGFALEPWYSSDESSDLP CCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCC VPVAPDPETWRMCRKIPVTDTGNANENARQSLREGATALEFVLSGNAYCTHEQLLLLLQD CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCEECHHHHHHHHHH IDTTLVPVYFSGEFSPTLLLDNLLSITAFKNNSGGFLVEKHDEYEAVEAALVNHGSLLEN CCCEEEEEEECCCCCHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHHCCHHHHHC YRTLSVSAVNDHENGASASEEIAFLLAGVSDSLYRLQAAGIPAETAARKIEIVLAVGPSH CEEEEEEEECCCCCCCCHHHHHHHHEECCCCHHHHHHCCCCCHHHCCCEEEEEEEECCHH FTELAKIRAVRFLLQHILKAYGAPTDHLPRIFARTSERNLSRLDPFTNLLRQTTEAVSAI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHH FGGCQTLQISPFDNGLSVSHTMAERVSGNIHLLLQREAGLDRVSDPARGSCYIEQMTREL HCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH SRSAWSLFRDIETAGGLNNARKSGMIDSLIRKTSEKRVASINTRSKTIVGVNRYPGNLTI HHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEEE QQEENLSEIRTILEKRTEGNESGAFELLRINTIMNKTKTGHHPAVFFWMQGDTATSFRQA ECCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHCCCCCCCEEEEEECCCCHHHHHHH AFAEDFFRCGGFDIAGSAQLVPEESSFQTVLDHKPAVLVLCIAEKDPCSSAETIARNLHT HHHHHHHHCCCCCCCCCCEECCCCCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHC LDPELLMVMAGKPPQDPEPLFRAGIDSFIHTGVNIIDHLTMYQHKTGVQ CCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STPEPDTLFAEFSPVSKAEWKAKASAELGEKPFNAIVWKTENGFALEPWYSSDESSDLP CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCC VPVAPDPETWRMCRKIPVTDTGNANENARQSLREGATALEFVLSGNAYCTHEQLLLLLQD CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCEECHHHHHHHHHH IDTTLVPVYFSGEFSPTLLLDNLLSITAFKNNSGGFLVEKHDEYEAVEAALVNHGSLLEN CCCEEEEEEECCCCCHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHHCCHHHHHC YRTLSVSAVNDHENGASASEEIAFLLAGVSDSLYRLQAAGIPAETAARKIEIVLAVGPSH CEEEEEEEECCCCCCCCHHHHHHHHEECCCCHHHHHHCCCCCHHHCCCEEEEEEEECCHH FTELAKIRAVRFLLQHILKAYGAPTDHLPRIFARTSERNLSRLDPFTNLLRQTTEAVSAI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHH FGGCQTLQISPFDNGLSVSHTMAERVSGNIHLLLQREAGLDRVSDPARGSCYIEQMTREL HCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH SRSAWSLFRDIETAGGLNNARKSGMIDSLIRKTSEKRVASINTRSKTIVGVNRYPGNLTI HHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEEE QQEENLSEIRTILEKRTEGNESGAFELLRINTIMNKTKTGHHPAVFFWMQGDTATSFRQA ECCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHCCCCCCCEEEEEECCCCHHHHHHH AFAEDFFRCGGFDIAGSAQLVPEESSFQTVLDHKPAVLVLCIAEKDPCSSAETIARNLHT HHHHHHHHCCCCCCCCCCEECCCCCCHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHC LDPELLMVMAGKPPQDPEPLFRAGIDSFIHTGVNIIDHLTMYQHKTGVQ CCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]