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The map label for this gene is apl [H]

Identifier: 119356845

GI number: 119356845

Start: 1158061

End: 1158705

Strand: Reverse

Name: apl [H]

Synonym: Cpha266_1018

Alternate gene names: 119356845

Gene position: 1158705-1158061 (Counterclockwise)

Preceding gene: 119356846

Following gene: 119356844

Centisome position: 36.97

GC content: 50.23

Gene sequence:

>645_bases
ATGCTTGAACCGGTTATAGACTATCTGCAGCATGCCGACCCGTTTTCGGTCTACGTATTTCTTTTTCTTATTGCCTTTCT
TGAAAACGTCATCCCGCCAATACCGGGAGATATTGCCGTCGCATTTATCGGCTACATGATCCATTCCAGCAAGCTCTCAT
TTACCGCTACTGTCTTGTGGGCATCACTCGGATCAACATCCGGCTTCATGCTGCTCTATATGCTCAGCCGCCGTCTCGGC
CTCAAGCTTTACGCCGTAGGAGAAAGCACAGCGCAACACCGTCTCTCACAAAGCGTGCACCGTTTTTTTCCGCCTTCCGA
CATGGAGACGCTGCGCCGGAAATTCTCAACGCACGGCTACCTTGCCGTCCTCTTCAACCGTTTTCTTTTGGGTTCAAGAG
CAGTCATTTCGGTTATGACCGGCCTCATGCACCTTAACCCCTTTCTGGTGCTGCTTGCTTCTCTTGCCAGCGCTACGCTG
TGGAACATCCTGCTGCTGTATGGCGGGCTTCTCCTTGGCAGAAACTGGCAGGAGATCGGTCGCTATGCCATAATGTACAG
TTTTCCTGTCACTGCGATTTTTGTCGTTTTGCTCTTTTTTTCAGTCCGGAAATTCATGAAGGAAAGAAAGCAGGGAGATC
ATTGA

Upstream 100 bases:

>100_bases
GGAATGTGCGGCACACGCGTTGCTTTTGTATCCCGACGAACAAGTCGGGATACTGTTTTTCTCAGAGCTCCCCTAACTTC
TTTTGAAATAAGGGCTTTCG

Downstream 100 bases:

>100_bases
GTTTTTTTTGTTATTTATGGGCGCCTCTGTTAATTTGTTCGGCATCCTTTATATATAATAAGGGGTGGCTACGCCTCACC
TGTACTCATGTTGCTCAAGA

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLEPVIDYLQHADPFSVYVFLFLIAFLENVIPPIPGDIAVAFIGYMIHSSKLSFTATVLWASLGSTSGFMLLYMLSRRLG
LKLYAVGESTAQHRLSQSVHRFFPPSDMETLRRKFSTHGYLAVLFNRFLLGSRAVISVMTGLMHLNPFLVLLASLASATL
WNILLLYGGLLLGRNWQEIGRYAIMYSFPVTAIFVVLLFFSVRKFMKERKQGDH

Sequences:

>Translated_214_residues
MLEPVIDYLQHADPFSVYVFLFLIAFLENVIPPIPGDIAVAFIGYMIHSSKLSFTATVLWASLGSTSGFMLLYMLSRRLG
LKLYAVGESTAQHRLSQSVHRFFPPSDMETLRRKFSTHGYLAVLFNRFLLGSRAVISVMTGLMHLNPFLVLLASLASATL
WNILLLYGGLLLGRNWQEIGRYAIMYSFPVTAIFVVLLFFSVRKFMKERKQGDH
>Mature_214_residues
MLEPVIDYLQHADPFSVYVFLFLIAFLENVIPPIPGDIAVAFIGYMIHSSKLSFTATVLWASLGSTSGFMLLYMLSRRLG
LKLYAVGESTAQHRLSQSVHRFFPPSDMETLRRKFSTHGYLAVLFNRFLLGSRAVISVMTGLMHLNPFLVLLASLASATL
WNILLLYGGLLLGRNWQEIGRYAIMYSFPVTAIFVVLLFFSVRKFMKERKQGDH

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24248; Mature: 24248

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPVIDYLQHADPFSVYVFLFLIAFLENVIPPIPGDIAVAFIGYMIHSSKLSFTATVLW
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ASLGSTSGFMLLYMLSRRLGLKLYAVGESTAQHRLSQSVHRFFPPSDMETLRRKFSTHGY
HHHCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
LAVLFNRFLLGSRAVISVMTGLMHLNPFLVLLASLASATLWNILLLYGGLLLGRNWQEIG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RYAIMYSFPVTAIFVVLLFFSVRKFMKERKQGDH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLEPVIDYLQHADPFSVYVFLFLIAFLENVIPPIPGDIAVAFIGYMIHSSKLSFTATVLW
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ASLGSTSGFMLLYMLSRRLGLKLYAVGESTAQHRLSQSVHRFFPPSDMETLRRKFSTHGY
HHHCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
LAVLFNRFLLGSRAVISVMTGLMHLNPFLVLLASLASATLWNILLLYGGLLLGRNWQEIG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RYAIMYSFPVTAIFVVLLFFSVRKFMKERKQGDH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]