| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356775
Identifier: 119356775
GI number: 119356775
Start: 1088748
End: 1089491
Strand: Direct
Name: 119356775
Synonym: Cpha266_0947
Alternate gene names: NA
Gene position: 1088748-1089491 (Clockwise)
Preceding gene: 119356774
Following gene: 119356776
Centisome position: 34.74
GC content: 48.12
Gene sequence:
>744_bases ATGTCACCAAAAAAAGAGCCGGAATTACCGAAGCAGTCGGCGTTGCCAGTAAGCGATAGCAGCGGATCGACTCCTCAAGG CAGCAGTTTACAGAAAACTGCCGATATAACGGGCCTGAAAGTGGCAGGCAAGTCTGTTGAGGCCTCTGGTTCACCCCCAT CAGCCGCAAAAAAAGACAGCGTTATTATACCGGAAGGTTTTGTTGTAAGAAAACTCAGGAAAGGCGAGTCGCTGTCAAAG ATATGTGAGAACGATTCAGTCTGTCAGGTTATTTTTATGAAGGTCAACAGGGTAGACCAGCGCCATTTTCCGGTTGGAAA AAGGGTTTTGTTGCCCGTTGAACGAGAAAAAGCAGAAAAATACGTTCCGATTCCAACAACGCTTACCGACAGCAGGGGTG AGCGTGAAATCAGAATTTATCTCTCGTCGCAATATTTCGGCGCTTATGAAAAGGGTGTGCTTGTTTTCTGGGGGGCTGTT TCGACAGGAAAGAGAACCAATGCAACGCCGCCGGGCAAGTTCGTTGTCAATTACAAACAGCGCTTTAAAAAGTCCATCAA GTACGATAATGCGCCTATGCCCTATTCGATAAATTATAACGGCGGCTACTTCATGCACCAGCAGTCGCTTCCAGGGTACC CCGCATCGCACGGCTGTGTCAGGCTTCTGATGAGCGACGCAGAGCGTCTTTTTACCTGGGCAAAACTGAAAGACCCGGTA ACGGTTGTCAGAAATGGTAAATGA
Upstream 100 bases:
>100_bases TTTTTCGGAAAACAGATTCAGGCCTGGAACATCTGAGAGAACGGCAAAACGTTTGGTCTGTGTATTGGTTGTTTTTTTTG CTGCGGCACCGGTTCTTGCA
Downstream 100 bases:
>100_bases CGGTTTTTTTCCCGAGCTTCACATCTCTTTTTCGCAGCGAGAGCATCCATACTGGCAGAGGAAGGAGAGGTGAAGCTGAG GGCAAGGCGCGACAGGTCTA
Product: ErfK/YbiS/YcfS/YnhG family protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; Peptidoglycan L D-Transpeptidase Lipoprotein; Enhanced Entry Protein EnhA Homolog; ErfK/YbiS/YcfS/YnhG Family; Enhanced Entry Protein EnhA; Enhanced Entry Protein; Protein Containg Ykud Domain
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSPKKEPELPKQSALPVSDSSGSTPQGSSLQKTADITGLKVAGKSVEASGSPPSAAKKDSVIIPEGFVVRKLRKGESLSK ICENDSVCQVIFMKVNRVDQRHFPVGKRVLLPVEREKAEKYVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAV STGKRTNATPPGKFVVNYKQRFKKSIKYDNAPMPYSINYNGGYFMHQQSLPGYPASHGCVRLLMSDAERLFTWAKLKDPV TVVRNGK
Sequences:
>Translated_247_residues MSPKKEPELPKQSALPVSDSSGSTPQGSSLQKTADITGLKVAGKSVEASGSPPSAAKKDSVIIPEGFVVRKLRKGESLSK ICENDSVCQVIFMKVNRVDQRHFPVGKRVLLPVEREKAEKYVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAV STGKRTNATPPGKFVVNYKQRFKKSIKYDNAPMPYSINYNGGYFMHQQSLPGYPASHGCVRLLMSDAERLFTWAKLKDPV TVVRNGK >Mature_246_residues SPKKEPELPKQSALPVSDSSGSTPQGSSLQKTADITGLKVAGKSVEASGSPPSAAKKDSVIIPEGFVVRKLRKGESLSKI CENDSVCQVIFMKVNRVDQRHFPVGKRVLLPVEREKAEKYVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAVS TGKRTNATPPGKFVVNYKQRFKKSIKYDNAPMPYSINYNGGYFMHQQSLPGYPASHGCVRLLMSDAERLFTWAKLKDPVT VVRNGK
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27331; Mature: 27200
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKKEPELPKQSALPVSDSSGSTPQGSSLQKTADITGLKVAGKSVEASGSPPSAAKKDS CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCEECCCCCCCCCCCCC VIIPEGFVVRKLRKGESLSKICENDSVCQVIFMKVNRVDQRHFPVGKRVLLPVEREKAEK EECCCCHHHHHHHCCCHHHHHHCCCCCEEHEEEHHHHCCCCCCCCCCEEEEECCHHHCCC YVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAVSTGKRTNATPPGKFVVNYKQ CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECHHH RFKKSIKYDNAPMPYSINYNGGYFMHQQSLPGYPASHGCVRLLMSDAERLFTWAKLKDPV HHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TVVRNGK EEEECCC >Mature Secondary Structure SPKKEPELPKQSALPVSDSSGSTPQGSSLQKTADITGLKVAGKSVEASGSPPSAAKKDS CCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCEECCCCCCCCCCCCC VIIPEGFVVRKLRKGESLSKICENDSVCQVIFMKVNRVDQRHFPVGKRVLLPVEREKAEK EECCCCHHHHHHHCCCHHHHHHCCCCCEEHEEEHHHHCCCCCCCCCCEEEEECCHHHCCC YVPIPTTLTDSRGEREIRIYLSSQYFGAYEKGVLVFWGAVSTGKRTNATPPGKFVVNYKQ CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECHHH RFKKSIKYDNAPMPYSINYNGGYFMHQQSLPGYPASHGCVRLLMSDAERLFTWAKLKDPV HHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TVVRNGK EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA