| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356744
Identifier: 119356744
GI number: 119356744
Start: 1043538
End: 1044035
Strand: Direct
Name: 119356744
Synonym: Cpha266_0916
Alternate gene names: NA
Gene position: 1043538-1044035 (Clockwise)
Preceding gene: 119356743
Following gene: 119356745
Centisome position: 33.3
GC content: 51.0
Gene sequence:
>498_bases ATGCCAACAACAAACGAGAACTTGAAAGAGGCTTTTGCCGGCGAAAGCCAGGCGAACCAGAAATACCTTGCCTTTGCAAA AGAGGCTGAAAAAGAGGGCTTTAAAAATGTGGCAAAGCTGTTTCGCACCACGGCCCAGGCTGAGCGGATCCATGCCGAGG GTCATCTTGACTCTCTTGGCGGCATCGGATCGACAGCCGAAAACCTCAATAAGGCTATTGAGGGTGAAACGTATGAGCAT AATGAAATGTATCCTCCCATGCTCGAACAGGCCCAGGCTGAGGGTCATCCTGCAAAGAGAATGTTTGCTTTTGCCGTCAA GGCTGAACAGGTCCATGCCGAACTGTACAAAAAGGCTCTTGAAGCGGTACAGAACGGTCAGGATATTACCGCAACCGAGG TCTGGCTCTGTCCGATCTGCGGCCATATCGAGCTTGGCAATCCCCCCGAGAAATGTCCGATTTGCGGCGCCAATTCATCG GTTTATGTTCAGGTATAG
Upstream 100 bases:
>100_bases GCTTCATTTTGGATTTCCTCCCAATCATTGCTACTATTTTACAGGTCGGGTTACATGTGCATCATTCTTTTTATCAATCC GGAAACAAGAAAAAATCAAT
Downstream 100 bases:
>100_bases CAGTTCTTATCCTGTTTTTTTTAAAGGCGGTTCGGGTAACCGCCTTTTTTATTGTGTACCTTCAACTACTTTTTGTACTT AGTAGGAAGGAGATATTTCT
Product: rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPTTNENLKEAFAGESQANQKYLAFAKEAEKEGFKNVAKLFRTTAQAERIHAEGHLDSLGGIGSTAENLNKAIEGETYEH NEMYPPMLEQAQAEGHPAKRMFAFAVKAEQVHAELYKKALEAVQNGQDITATEVWLCPICGHIELGNPPEKCPICGANSS VYVQV
Sequences:
>Translated_165_residues MPTTNENLKEAFAGESQANQKYLAFAKEAEKEGFKNVAKLFRTTAQAERIHAEGHLDSLGGIGSTAENLNKAIEGETYEH NEMYPPMLEQAQAEGHPAKRMFAFAVKAEQVHAELYKKALEAVQNGQDITATEVWLCPICGHIELGNPPEKCPICGANSS VYVQV >Mature_164_residues PTTNENLKEAFAGESQANQKYLAFAKEAEKEGFKNVAKLFRTTAQAERIHAEGHLDSLGGIGSTAENLNKAIEGETYEHN EMYPPMLEQAQAEGHPAKRMFAFAVKAEQVHAELYKKALEAVQNGQDITATEVWLCPICGHIELGNPPEKCPICGANSSV YVQV
Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 18076; Mature: 17945
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTNENLKEAFAGESQANQKYLAFAKEAEKEGFKNVAKLFRTTAQAERIHAEGHLDSLG CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC GIGSTAENLNKAIEGETYEHNEMYPPMLEQAQAEGHPAKRMFAFAVKAEQVHAELYKKAL CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAVQNGQDITATEVWLCPICGHIELGNPPEKCPICGANSSVYVQV HHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure PTTNENLKEAFAGESQANQKYLAFAKEAEKEGFKNVAKLFRTTAQAERIHAEGHLDSLG CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC GIGSTAENLNKAIEGETYEHNEMYPPMLEQAQAEGHPAKRMFAFAVKAEQVHAELYKKAL CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAVQNGQDITATEVWLCPICGHIELGNPPEKCPICGANSSVYVQV HHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]