| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356737
Identifier: 119356737
GI number: 119356737
Start: 1038037
End: 1038561
Strand: Reverse
Name: 119356737
Synonym: Cpha266_0909
Alternate gene names: NA
Gene position: 1038561-1038037 (Counterclockwise)
Preceding gene: 119356738
Following gene: 119356735
Centisome position: 33.14
GC content: 46.67
Gene sequence:
>525_bases TTGCGTTTTTGCCGGCGGCTGCTCAGAACCATTGCCCGATTGCAGAAAAAGGGAACCTTTACCAGACCAAATGCTTTTCA TATCAGAAGCGAAAAGCAACAACACACTCCCCTGCACATGCCCACATGGTACGACAAGCTGAAAAAGCCCTGGTTCTCTC CCCCGAAAAAAGTGTTCGGACCGGCTTGGGCTGTTTTATATCTCTTTATCGTTTCGGCACTCGTCACATACTATTTCACA CCCGTCAAGCCGCACTATCATGCGGCAGGCATCATACTCGTTATTCATTTCACAGCAAGCTTCAGTTGGACTCAACTGTT TTTCACCCGAAAAAAAATTCTTTTGGCTTTTGTTGATATTCTTGTAATCGATACAACGCTCATCGCCCTCATCATACTCT TAACGCAGTCAAGCCTGCTTTCAGCATTTCTGCTTCTGCCCTATCTCGGCTGGTGTCTGTTTGCCTCCGCTCTTAACTGG AGCATCTATCGGCTGAACCCTGGAGAATCAGATGAAGATTCGTAA
Upstream 100 bases:
>100_bases TCTGTAAGCGAACAACCCGATGAAACCCTGCAGATTCAGTTTTTTTGATTGCTGAATCACAAGCAACCGCTCCCTCCTGA AGTTCGGGGGGGGGAATCGG
Downstream 100 bases:
>100_bases AAGGAGCTTTTCGGGAATGATCCATGACGTCGCAACCTGCATTTGCGGCAGCAACCCTACCACAAAACGAGAGCCAATGT ATTCTCACCTCGATCCCGCG
Product: TspO and MBR like proteins
Products: NA
Alternate protein names: CrtK Protein; TspO And MBR Like Proteins
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRFCRRLLRTIARLQKKGTFTRPNAFHIRSEKQQHTPLHMPTWYDKLKKPWFSPPKKVFGPAWAVLYLFIVSALVTYYFT PVKPHYHAAGIILVIHFTASFSWTQLFFTRKKILLAFVDILVIDTTLIALIILLTQSSLLSAFLLLPYLGWCLFASALNW SIYRLNPGESDEDS
Sequences:
>Translated_174_residues MRFCRRLLRTIARLQKKGTFTRPNAFHIRSEKQQHTPLHMPTWYDKLKKPWFSPPKKVFGPAWAVLYLFIVSALVTYYFT PVKPHYHAAGIILVIHFTASFSWTQLFFTRKKILLAFVDILVIDTTLIALIILLTQSSLLSAFLLLPYLGWCLFASALNW SIYRLNPGESDEDS >Mature_174_residues MRFCRRLLRTIARLQKKGTFTRPNAFHIRSEKQQHTPLHMPTWYDKLKKPWFSPPKKVFGPAWAVLYLFIVSALVTYYFT PVKPHYHAAGIILVIHFTASFSWTQLFFTRKKILLAFVDILVIDTTLIALIILLTQSSLLSAFLLLPYLGWCLFASALNW SIYRLNPGESDEDS
Specific function: Unknown
COG id: COG3476
COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74275350, Length=130, Percent_Identity=30, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI19920472, Length=157, Percent_Identity=29.9363057324841, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20234; Mature: 20234
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFCRRLLRTIARLQKKGTFTRPNAFHIRSEKQQHTPLHMPTWYDKLKKPWFSPPKKVFG CHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHCCCCCCCCHHHHHHCCCCCCCCHHHHH PAWAVLYLFIVSALVTYYFTPVKPHYHAAGIILVIHFTASFSWTQLFFTRKKILLAFVDI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHH LVIDTTLIALIILLTQSSLLSAFLLLPYLGWCLFASALNWSIYRLNPGESDEDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC >Mature Secondary Structure MRFCRRLLRTIARLQKKGTFTRPNAFHIRSEKQQHTPLHMPTWYDKLKKPWFSPPKKVFG CHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHCCCCCCCCHHHHHHCCCCCCCCHHHHH PAWAVLYLFIVSALVTYYFTPVKPHYHAAGIILVIHFTASFSWTQLFFTRKKILLAFVDI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHH LVIDTTLIALIILLTQSSLLSAFLLLPYLGWCLFASALNWSIYRLNPGESDEDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA