| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356735
Identifier: 119356735
GI number: 119356735
Start: 1036856
End: 1037380
Strand: Reverse
Name: 119356735
Synonym: Cpha266_0907
Alternate gene names: NA
Gene position: 1037380-1036856 (Counterclockwise)
Preceding gene: 119356737
Following gene: 119356733
Centisome position: 33.1
GC content: 51.62
Gene sequence:
>525_bases ATGGGCGCAAGCAGACATAAACTTATGTTCCCTGCACCGGAAATCTGCTTTTCCTGTTATGGATTATACGAAACGACACC CATGAAATATTCAGAAGCAAAACAGGGCAGAACGTTCATCATCAGGCTTGAAGATGGCGAAACCGTTCACGAAGAGATCG AAACGTTTGCAAAAAAACAGGCCATCGCACGAGCTTCGGTGTTACTGCTCGGCGGTGCCGACAAGGAGAGCTCCCTGGTT GTCGGCCCCGAAGAGAGCCGCGCCGTCCCGATTACCCCGATGTACCTCGAGCTGTATGATGCCCATGAGGTATTTGGCGT TGGCACCATATTTCCTGACGATACCGGAAACCCGGTCATTCACCTGCACATGGCTTGCGGACGTGAGGAAAACACGGTTA CCGGATGCATTCGCAATGGCGTTAAGGTCTGGCTCGTCATGGAGGTTATTCTGACAGAGCTGCTTGATACATCCGCATCC CGCATCATGGATCAGGAATCAGGATTCAAGCTGCTTGAACCCTGA
Upstream 100 bases:
>100_bases CTCGACATCGCGGGGTCTGCAAAGGGATGCACAAGCTTGAAAGAGAGAAGATCCCCTGCTCCACGAAAACAGAACTCTCT CGATTTCTGTGTATATTTGC
Downstream 100 bases:
>100_bases TATATACCGGAACCTACCTGAACGGGTTTTCGAAATAAGGTTTGCCCAGAGAGTTCGCAAGCGCTTCATGGGTAATGTGG CCCTGCCACGTGTTGAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGASRHKLMFPAPEICFSCYGLYETTPMKYSEAKQGRTFIIRLEDGETVHEEIETFAKKQAIARASVLLLGGADKESSLV VGPEESRAVPITPMYLELYDAHEVFGVGTIFPDDTGNPVIHLHMACGREENTVTGCIRNGVKVWLVMEVILTELLDTSAS RIMDQESGFKLLEP
Sequences:
>Translated_174_residues MGASRHKLMFPAPEICFSCYGLYETTPMKYSEAKQGRTFIIRLEDGETVHEEIETFAKKQAIARASVLLLGGADKESSLV VGPEESRAVPITPMYLELYDAHEVFGVGTIFPDDTGNPVIHLHMACGREENTVTGCIRNGVKVWLVMEVILTELLDTSAS RIMDQESGFKLLEP >Mature_173_residues GASRHKLMFPAPEICFSCYGLYETTPMKYSEAKQGRTFIIRLEDGETVHEEIETFAKKQAIARASVLLLGGADKESSLVV GPEESRAVPITPMYLELYDAHEVFGVGTIFPDDTGNPVIHLHMACGREENTVTGCIRNGVKVWLVMEVILTELLDTSASR IMDQESGFKLLEP
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19281; Mature: 19150
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASRHKLMFPAPEICFSCYGLYETTPMKYSEAKQGRTFIIRLEDGETVHEEIETFAKKQ CCCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH AIARASVLLLGGADKESSLVVGPEESRAVPITPMYLELYDAHEVFGVGTIFPDDTGNPVI HHHHEEEEEEECCCCCCCEEECCCCCCEECCCHHEEEEECCHHHEEEEEECCCCCCCCEE HLHMACGREENTVTGCIRNGVKVWLVMEVILTELLDTSASRIMDQESGFKLLEP EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC >Mature Secondary Structure GASRHKLMFPAPEICFSCYGLYETTPMKYSEAKQGRTFIIRLEDGETVHEEIETFAKKQ CCCCCCEECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH AIARASVLLLGGADKESSLVVGPEESRAVPITPMYLELYDAHEVFGVGTIFPDDTGNPVI HHHHEEEEEEECCCCCCCEEECCCCCCEECCCHHEEEEECCHHHEEEEEECCCCCCCCEE HLHMACGREENTVTGCIRNGVKVWLVMEVILTELLDTSASRIMDQESGFKLLEP EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA