| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ald [H]
Identifier: 119356734
GI number: 119356734
Start: 1035739
End: 1036842
Strand: Direct
Name: ald [H]
Synonym: Cpha266_0906
Alternate gene names: 119356734
Gene position: 1035739-1036842 (Clockwise)
Preceding gene: 119356732
Following gene: 119356736
Centisome position: 33.05
GC content: 54.62
Gene sequence:
>1104_bases ATGAATATCGGAATTCCAAAAGAGATCAAAAACAGGGAGAGCAGAGTCTCTTGCACACCATCCGGAGTGCGCCATCTGGT CAATGCCGGCCATCATGTTGCTGTTGAAAAGGGCGCAGGTGAAGGGAGCGGCTTCAGCGACGACAAGTACCGGCGAGCGG GAGCAATGGTTGAACCATCTGCGGAAAAAGTATGGCAGAACGAACTTGTTGTGAAGGTCAAGGAGCCACTCAGCGAGGAG TTCGGTTATTTAAGGGACGATCTCATTCTTTTTACCTTTCTGCATCTTGCCGGTAATGCCGGGTTGACGGAGCAGCTTCT TGCTGCCGGAACAACCGCTCTTGCCTATGAAACCGTTCAGGAGGGCGGACGTCTGCCTCTGCTTGCTCCTATGAGCGAGA TTGCCGGAAAGATGAGTGTTCTCATGGGCGCTTATTATCTGGGTTTTCAGCATGGCGGCGAGGGCAAACTGCTGGGCGGT GTTCCCGGTGTTTTGCCGGGCAAGGTGGTTGTTCTTGGCGGAGGATCGGCCGGTATGCATGCTGCAAAGGTTGCCGCAGG TCTTGGAGCGGATGTGACCTTGCTTGAGCTTGACCAGGAGCGTTTGCGCGCGCTTGAATCAGTTCTCCCGTCGCAGGTGC ATACCCTCTACTCAACCGAACAGCATATTGATGAACAGCTTGAGGTAGCCGATGTGCTTATCGGCGCTGTGCTTGTTCCC GGTGCAACCGCCCCGAAACTGGTCAGTCGAAGGATGCTGCAGCGAATAAAACCCGGCGCAGTGCTGGTGGATATCGCCAT TGATCAGGGTGGATGTTTCGCCTCTTCACGGCCGACCACCCATGAAGATCCTGTGTTTCTTGAAGAGAGCGTTGTTCACT ACTGTGTTGCCAATATGCCGGCGGCATACCCTCAAACCTCAACAGAAGCCCTTGCCGGAGCTTCGTTGCCCTATATCAGA AGGATAGCCGATCTCGGTCTCGCAAGTGCCACGGTTATCATGCCCGGCCTTGCCGGAGGTCTCAACACGTGGCAGGGCCA CATTACCCATGAAGCGCTTGCGAACTCTCTGGGCAAACCTTATTTCGAAAACCCGTTCAGGTAG
Upstream 100 bases:
>100_bases TGAAATGGTTACATTGCTTTCAGGGCTTTTTATCGTTTTTATTGCTGCTCAACCGTTTGATGGTTGGGAGAAACCGGCTT TATAGAGGAGAGTTGCCGTT
Downstream 100 bases:
>100_bases GTTCCGGTATATATCAGGGTTCAAGCAGCTTGAATCCTGATTCCTGATCCATGATGCGGGATGCGGATGTATCAAGCAGC TCTGTCAGAATAACCTCCAT
Product: L-alanine dehydrogenase
Products: NA
Alternate protein names: 40 kDa antigen; TB43 [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNIGIPKEIKNRESRVSCTPSGVRHLVNAGHHVAVEKGAGEGSGFSDDKYRRAGAMVEPSAEKVWQNELVVKVKEPLSEE FGYLRDDLILFTFLHLAGNAGLTEQLLAAGTTALAYETVQEGGRLPLLAPMSEIAGKMSVLMGAYYLGFQHGGEGKLLGG VPGVLPGKVVVLGGGSAGMHAAKVAAGLGADVTLLELDQERLRALESVLPSQVHTLYSTEQHIDEQLEVADVLIGAVLVP GATAPKLVSRRMLQRIKPGAVLVDIAIDQGGCFASSRPTTHEDPVFLEESVVHYCVANMPAAYPQTSTEALAGASLPYIR RIADLGLASATVIMPGLAGGLNTWQGHITHEALANSLGKPYFENPFR
Sequences:
>Translated_367_residues MNIGIPKEIKNRESRVSCTPSGVRHLVNAGHHVAVEKGAGEGSGFSDDKYRRAGAMVEPSAEKVWQNELVVKVKEPLSEE FGYLRDDLILFTFLHLAGNAGLTEQLLAAGTTALAYETVQEGGRLPLLAPMSEIAGKMSVLMGAYYLGFQHGGEGKLLGG VPGVLPGKVVVLGGGSAGMHAAKVAAGLGADVTLLELDQERLRALESVLPSQVHTLYSTEQHIDEQLEVADVLIGAVLVP GATAPKLVSRRMLQRIKPGAVLVDIAIDQGGCFASSRPTTHEDPVFLEESVVHYCVANMPAAYPQTSTEALAGASLPYIR RIADLGLASATVIMPGLAGGLNTWQGHITHEALANSLGKPYFENPFR >Mature_367_residues MNIGIPKEIKNRESRVSCTPSGVRHLVNAGHHVAVEKGAGEGSGFSDDKYRRAGAMVEPSAEKVWQNELVVKVKEPLSEE FGYLRDDLILFTFLHLAGNAGLTEQLLAAGTTALAYETVQEGGRLPLLAPMSEIAGKMSVLMGAYYLGFQHGGEGKLLGG VPGVLPGKVVVLGGGSAGMHAAKVAAGLGADVTLLELDQERLRALESVLPSQVHTLYSTEQHIDEQLEVADVLIGAVLVP GATAPKLVSRRMLQRIKPGAVLVDIAIDQGGCFASSRPTTHEDPVFLEESVVHYCVANMPAAYPQTSTEALAGASLPYIR RIADLGLASATVIMPGLAGGLNTWQGHITHEALANSLGKPYFENPFR
Specific function: May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=332, Percent_Identity=31.9277108433735, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI122939153, Length=332, Percent_Identity=31.9277108433735, Blast_Score=151, Evalue=7e-37, Organism=Escherichia coli, GI1787887, Length=343, Percent_Identity=31.4868804664723, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17550456, Length=333, Percent_Identity=31.5315315315315, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 38843; Mature: 38843
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGIPKEIKNRESRVSCTPSGVRHLVNAGHHVAVEKGAGEGSGFSDDKYRRAGAMVEPS CCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCC AEKVWQNELVVKVKEPLSEEFGYLRDDLILFTFLHLAGNAGLTEQLLAAGTTALAYETVQ HHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH EGGRLPLLAPMSEIAGKMSVLMGAYYLGFQHGGEGKLLGGVPGVLPGKVVVLGGGSAGMH CCCCCCEECCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCCCCHH AAKVAAGLGADVTLLELDQERLRALESVLPSQVHTLYSTEQHIDEQLEVADVLIGAVLVP HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GATAPKLVSRRMLQRIKPGAVLVDIAIDQGGCFASSRPTTHEDPVFLEESVVHYCVANMP CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC AAYPQTSTEALAGASLPYIRRIADLGLASATVIMPGLAGGLNTWQGHITHEALANSLGKP CCCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC YFENPFR CCCCCCC >Mature Secondary Structure MNIGIPKEIKNRESRVSCTPSGVRHLVNAGHHVAVEKGAGEGSGFSDDKYRRAGAMVEPS CCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCC AEKVWQNELVVKVKEPLSEEFGYLRDDLILFTFLHLAGNAGLTEQLLAAGTTALAYETVQ HHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH EGGRLPLLAPMSEIAGKMSVLMGAYYLGFQHGGEGKLLGGVPGVLPGKVVVLGGGSAGMH CCCCCCEECCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCCCCHH AAKVAAGLGADVTLLELDQERLRALESVLPSQVHTLYSTEQHIDEQLEVADVLIGAVLVP HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GATAPKLVSRRMLQRIKPGAVLVDIAIDQGGCFASSRPTTHEDPVFLEESVVHYCVANMP CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC AAYPQTSTEALAGASLPYIRRIADLGLASATVIMPGLAGGLNTWQGHITHEALANSLGKP CCCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC YFENPFR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1587598; 9634230; 12218036; 7822223 [H]