Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356732

Identifier: 119356732

GI number: 119356732

Start: 1034440

End: 1035195

Strand: Direct

Name: 119356732

Synonym: Cpha266_0904

Alternate gene names: NA

Gene position: 1034440-1035195 (Clockwise)

Preceding gene: 119356731

Following gene: 119356734

Centisome position: 33.01

GC content: 55.03

Gene sequence:

>756_bases
ATGCATTCGAAATATCAGTCAGGCAGCAAAACAGCGGACGGCATTCCCTATACCGTGCAGCTCAGCGCGCGGGCAAAGTA
TCCCCGTCTGAAAATGCTGCCCCACGAAGGGCTTGTCGTGGTGATTCCTTCCGGTTACGACAGAAAACGGCTTCCCGATC
TCCTTCTGCAGTACAGGGAGTGGATCAGGAAGGCCAGTGAAAAAATCGAGGGTCATCGACTTCAGCCGGAACAGGCCGGA
GCGTCAGTTCTGCCTGTTGAGGCGGTGTTTCACTATCACGGTGAACGGTGGGAGATTGCCTATCGAGAGGGCGGCGTAGG
AGTGGCTGAAGCTTTTGAACGTTCAGGAAACGTTGTTGAGGTGTGCGGTGATATCGCCAATACCTTCCTGTGCCGGGCTG
TGCTCAGGCTCTGGGTGAAGAATAAGGCGCACAGGGAGCTTATACCGAAACTGCGGGGCCTTGCCGATCTGCACGGTTTG
AGCTATACCAGAGCCGGAGTTCGTCTTCAGCGATCGCGATGGGGGAGTTGCACCAGTGCAGGAACCATAACCCTGAATAC
CAAGCTGCTTTTTCTTCCGCCCCATCTGGTTCATTCGGTGATGGTGCATGAACTGTGCCATACCATCCAGATGAACCACT
CCCGGTTGTTCTGGAAGCAGGTTGAAACTATTGATGCGGCATATCGCACGCATGACAGCGAGATGAAGAGCGCCTGGAAG
TATGTTCCGGCCTGGGCTGCCCGATCGGATGCTTGA

Upstream 100 bases:

>100_bases
GGTTCGGTACATTACGGGCATCAACACTCTTGATGAAGCGCGTTGGTGCCCTTTTGTCGGTACCCGAGCGCCGGTTTTAC
TCCAGCAATCAAGTTCTCTT

Downstream 100 bases:

>100_bases
TGGTGTGCCATTGGAGCAATACCTGCAATCTGACCGTTACAGCCCACGGTAACGCTTTTTTGTCATCTCTCTGAGTCCCG
AAAAAAACAGGGAGAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MHSKYQSGSKTADGIPYTVQLSARAKYPRLKMLPHEGLVVVIPSGYDRKRLPDLLLQYREWIRKASEKIEGHRLQPEQAG
ASVLPVEAVFHYHGERWEIAYREGGVGVAEAFERSGNVVEVCGDIANTFLCRAVLRLWVKNKAHRELIPKLRGLADLHGL
SYTRAGVRLQRSRWGSCTSAGTITLNTKLLFLPPHLVHSVMVHELCHTIQMNHSRLFWKQVETIDAAYRTHDSEMKSAWK
YVPAWAARSDA

Sequences:

>Translated_251_residues
MHSKYQSGSKTADGIPYTVQLSARAKYPRLKMLPHEGLVVVIPSGYDRKRLPDLLLQYREWIRKASEKIEGHRLQPEQAG
ASVLPVEAVFHYHGERWEIAYREGGVGVAEAFERSGNVVEVCGDIANTFLCRAVLRLWVKNKAHRELIPKLRGLADLHGL
SYTRAGVRLQRSRWGSCTSAGTITLNTKLLFLPPHLVHSVMVHELCHTIQMNHSRLFWKQVETIDAAYRTHDSEMKSAWK
YVPAWAARSDA
>Mature_251_residues
MHSKYQSGSKTADGIPYTVQLSARAKYPRLKMLPHEGLVVVIPSGYDRKRLPDLLLQYREWIRKASEKIEGHRLQPEQAG
ASVLPVEAVFHYHGERWEIAYREGGVGVAEAFERSGNVVEVCGDIANTFLCRAVLRLWVKNKAHRELIPKLRGLADLHGL
SYTRAGVRLQRSRWGSCTSAGTITLNTKLLFLPPHLVHSVMVHELCHTIQMNHSRLFWKQVETIDAAYRTHDSEMKSAWK
YVPAWAARSDA

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28519; Mature: 28519

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKYQSGSKTADGIPYTVQLSARAKYPRLKMLPHEGLVVVIPSGYDRKRLPDLLLQYRE
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
WIRKASEKIEGHRLQPEQAGASVLPVEAVFHYHGERWEIAYREGGVGVAEAFERSGNVVE
HHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCEEE
VCGDIANTFLCRAVLRLWVKNKAHRELIPKLRGLADLHGLSYTRAGVRLQRSRWGSCTSA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCEEHHHCCCCCCCC
GTITLNTKLLFLPPHLVHSVMVHELCHTIQMNHSRLFWKQVETIDAAYRTHDSEMKSAWK
CEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
YVPAWAARSDA
HCCCHHCCCCC
>Mature Secondary Structure
MHSKYQSGSKTADGIPYTVQLSARAKYPRLKMLPHEGLVVVIPSGYDRKRLPDLLLQYRE
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
WIRKASEKIEGHRLQPEQAGASVLPVEAVFHYHGERWEIAYREGGVGVAEAFERSGNVVE
HHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCEEE
VCGDIANTFLCRAVLRLWVKNKAHRELIPKLRGLADLHGLSYTRAGVRLQRSRWGSCTSA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCEEHHHCCCCCCCC
GTITLNTKLLFLPPHLVHSVMVHELCHTIQMNHSRLFWKQVETIDAAYRTHDSEMKSAWK
CEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
YVPAWAARSDA
HCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA