| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356718
Identifier: 119356718
GI number: 119356718
Start: 1014359
End: 1015405
Strand: Direct
Name: 119356718
Synonym: Cpha266_0890
Alternate gene names: NA
Gene position: 1014359-1015405 (Clockwise)
Preceding gene: 119356717
Following gene: 119356725
Centisome position: 32.37
GC content: 49.0
Gene sequence:
>1047_bases ATGAAAGCTTCAATACTTTATGCAGGACTTGCAGCACCTTATGCCGGCTGGTTAGCTATTGATGAGCTTGCGGAGTTGCT GGCGCACTACTTTCAAGCTGAAATCCTGTCGCCAAAAGTTATGCCGGGCCTCCTGCTTGATCGCTTTATCCATAGCCGTC AGGTCAGATTCGAATCATTACAAACCAATGGAGGTGACGTTCTGATAGTCGTTGCGTGTAGTCCCGGTGATCTTGGAATG ATCAGTGCCATACCGGACTGCCGCAAGAAATTCGACAAAATTTATGGATTTGTCACAGATTCATATTTCCATGCCGGATT TGTCAAGGAAACAGCTCTTTTTGATGCCATAACGGTTACCGCTCACGAAGATGTTGAGTATCCAAAAACAAACTTCGGTA TTCCTGTCCACCAGTTATATCAGGGTACAGATGGTCTGACCTGGGCTCCACGCAACCTGATGCATCGTGAAATTGACGTG ATGGGTTTCGGGCGCATACCACCAACCTTTCACTCGCACTTTTCCCAATGCTTTCATTCCCCGGCTTCTCCGTATTTGTA TCTGCACTCTCCGCTGGGCCATATATCAGGAGATGCCGTGCATCTTGAGCGCGGCATGTTGTTCAAGCTGCTCCATCGAA CCCGTATTTCACTGGCATTTCATCTTTTCGTTGAGCCTCAGGGCGATCGGCCACGTTCAATGATGGTGACCAGCCGGTGG CTTGAATCATTGCTGTCCGGATGTATTGTTGCCGGACAACGACCTGTTTCACGCATGGCCGAAGATATGCTGTTCTGGCA AGATTCGACCGTTGAGCTCTCTGTGGATCCAAAGGTTGCGGCTGACGAATTGATAGCTCTTTTGTCGCAGAATGATGCAC TGGAGCAACAACGGCGTACCAATATTTACCAGATGCTTAGTCACCATGACTGGCGCTACCGGATAGAAGCCTTTTGTAAA ATGATGGATCTCCCGATACCTGAAGCACTGCATGATGATCTGTCGCGTTTGCATGAGCTTGCCGCTTCGTTCGATCACTC GCGCTGA
Upstream 100 bases:
>100_bases ATTGCATTATTGCCATTTAAAAAGAAGATGGACTCATCACAGTGAATGCGAAAACCATTTCAGAACGGTTTACGTGTGCA TTCGCCATTTTTTGTGAATT
Downstream 100 bases:
>100_bases TTTTGGCTTCAAGAACTTCTGCAGTCAAAACAGGAACATGGCTGCTTTCTGAAACGAAAACATGCGCCAATACAGAAAAC AGCAACATGGCTGAAAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKASILYAGLAAPYAGWLAIDELAELLAHYFQAEILSPKVMPGLLLDRFIHSRQVRFESLQTNGGDVLIVVACSPGDLGM ISAIPDCRKKFDKIYGFVTDSYFHAGFVKETALFDAITVTAHEDVEYPKTNFGIPVHQLYQGTDGLTWAPRNLMHREIDV MGFGRIPPTFHSHFSQCFHSPASPYLYLHSPLGHISGDAVHLERGMLFKLLHRTRISLAFHLFVEPQGDRPRSMMVTSRW LESLLSGCIVAGQRPVSRMAEDMLFWQDSTVELSVDPKVAADELIALLSQNDALEQQRRTNIYQMLSHHDWRYRIEAFCK MMDLPIPEALHDDLSRLHELAASFDHSR
Sequences:
>Translated_348_residues MKASILYAGLAAPYAGWLAIDELAELLAHYFQAEILSPKVMPGLLLDRFIHSRQVRFESLQTNGGDVLIVVACSPGDLGM ISAIPDCRKKFDKIYGFVTDSYFHAGFVKETALFDAITVTAHEDVEYPKTNFGIPVHQLYQGTDGLTWAPRNLMHREIDV MGFGRIPPTFHSHFSQCFHSPASPYLYLHSPLGHISGDAVHLERGMLFKLLHRTRISLAFHLFVEPQGDRPRSMMVTSRW LESLLSGCIVAGQRPVSRMAEDMLFWQDSTVELSVDPKVAADELIALLSQNDALEQQRRTNIYQMLSHHDWRYRIEAFCK MMDLPIPEALHDDLSRLHELAASFDHSR >Mature_348_residues MKASILYAGLAAPYAGWLAIDELAELLAHYFQAEILSPKVMPGLLLDRFIHSRQVRFESLQTNGGDVLIVVACSPGDLGM ISAIPDCRKKFDKIYGFVTDSYFHAGFVKETALFDAITVTAHEDVEYPKTNFGIPVHQLYQGTDGLTWAPRNLMHREIDV MGFGRIPPTFHSHFSQCFHSPASPYLYLHSPLGHISGDAVHLERGMLFKLLHRTRISLAFHLFVEPQGDRPRSMMVTSRW LESLLSGCIVAGQRPVSRMAEDMLFWQDSTVELSVDPKVAADELIALLSQNDALEQQRRTNIYQMLSHHDWRYRIEAFCK MMDLPIPEALHDDLSRLHELAASFDHSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39436; Mature: 39436
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASILYAGLAAPYAGWLAIDELAELLAHYFQAEILSPKVMPGLLLDRFIHSRQVRFESL CCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QTNGGDVLIVVACSPGDLGMISAIPDCRKKFDKIYGFVTDSYFHAGFVKETALFDAITVT CCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE AHEDVEYPKTNFGIPVHQLYQGTDGLTWAPRNLMHREIDVMGFGRIPPTFHSHFSQCFHS ECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCEEECCCCCCHHHHHHHHHHCC PASPYLYLHSPLGHISGDAVHLERGMLFKLLHRTRISLAFHLFVEPQGDRPRSMMVTSRW CCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHH LESLLSGCIVAGQRPVSRMAEDMLFWQDSTVELSVDPKVAADELIALLSQNDALEQQRRT HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHH NIYQMLSHHDWRYRIEAFCKMMDLPIPEALHDDLSRLHELAASFDHSR HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKASILYAGLAAPYAGWLAIDELAELLAHYFQAEILSPKVMPGLLLDRFIHSRQVRFESL CCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QTNGGDVLIVVACSPGDLGMISAIPDCRKKFDKIYGFVTDSYFHAGFVKETALFDAITVT CCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE AHEDVEYPKTNFGIPVHQLYQGTDGLTWAPRNLMHREIDVMGFGRIPPTFHSHFSQCFHS ECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCEEECCCCCCHHHHHHHHHHCC PASPYLYLHSPLGHISGDAVHLERGMLFKLLHRTRISLAFHLFVEPQGDRPRSMMVTSRW CCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHH LESLLSGCIVAGQRPVSRMAEDMLFWQDSTVELSVDPKVAADELIALLSQNDALEQQRRT HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHH NIYQMLSHHDWRYRIEAFCKMMDLPIPEALHDDLSRLHELAASFDHSR HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA