| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356689
Identifier: 119356689
GI number: 119356689
Start: 982322
End: 983218
Strand: Direct
Name: 119356689
Synonym: Cpha266_0858
Alternate gene names: NA
Gene position: 982322-983218 (Clockwise)
Preceding gene: 119356688
Following gene: 119356690
Centisome position: 31.35
GC content: 47.38
Gene sequence:
>897_bases ATGAAAAAACGCAAGGAATATTCAAAAGAGAAAAAGATGTTTCTGTTGTGGCTTTCCGCAGCGGCTGCAATGCATATTCT TTTGCTATCCGGACTTTTTTTTCTTGATGTTTTCAATCAGGCTAAACAGCGGGTTCCGAAAATTATCAATGTAAGTCTTG TGTCGCTTCCTGGAACCGGTGCTTCAGCTGCTCCTCGGGCTGAAGGAGCTGGGAGAGCGGTAACTGTTGAAAAAAAAACG GTCGAAACGCCACAGGCCGCTTCCAGGCCTGAGCAGCAGGTAAAACCCAAAGAGAGTGCGGCAATACCCGCCCCTGTAAA AAAACCGGAGAAGGAGATCTCCGAGGCACCGGCAAAGCCCAAAGCATTACCGGTTGCAAACCGGAAACCTGCTCAGCTTG ACAAAACGCTTGATCGCCTGAAGCTCGAGGTAAACAGAAAAGCTGCGACCCAACCTTCCCGTGCCGATCAGCTCGGCAGT GCGCTTACAAAACTCCAGGATAAGGTCCGCTCGCAGGGTGCAAAGGGAGCAGGCAGCAACGATCGGGAGGTGGCTTCTTC TGCAGGTGGAGCAGGGGGAGTTGGAAAAGGGGCTTCGGGAGGTGGGGTCAGTGATCCATATAAAGTGAGTATTGCCAGCA TTATCCAGAACAACTGGGAGTTTTCCTCACAATTGACGAAAAACGGCTATGGTATGGAGGTTTATGTGAGTATCAATATT CTTCCTGATGGTACGATTAATGAAATAAGGTTCGATAAACGAGCTGCAAGTGAATATCTTAACAATTCTGTAAAAAAAGC TCTTGAAAAGTCATCACCTCTTCCTGATTTGCCAAAAAAATACGGAGCTTCACTAAGGATAGGCTTTGTTTTTACACCTG AAGGCGTTACGTTGTAA
Upstream 100 bases:
>100_bases AATGTCATGGCCCAGATCAGGGAAGCGGGAATAGAAAAAATCGGCATGGTGACCGATCCGGCCCCTCTGCCGGCGCAACG TTTGAAGTGAGTCACCCTGT
Downstream 100 bases:
>100_bases ATTGCAATGAGTCATGCTGTTCAGGGTTTTATGATCTTCTGCAATGTTTGGCAGTTACGAGGCAGATTGCTTGAGGCTTC TGCAAACGTGGACGGTACTG
Product: Fis family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKKRKEYSKEKKMFLLWLSAAAAMHILLLSGLFFLDVFNQAKQRVPKIINVSLVSLPGTGASAAPRAEGAGRAVTVEKKT VETPQAASRPEQQVKPKESAAIPAPVKKPEKEISEAPAKPKALPVANRKPAQLDKTLDRLKLEVNRKAATQPSRADQLGS ALTKLQDKVRSQGAKGAGSNDREVASSAGGAGGVGKGASGGGVSDPYKVSIASIIQNNWEFSSQLTKNGYGMEVYVSINI LPDGTINEIRFDKRAASEYLNNSVKKALEKSSPLPDLPKKYGASLRIGFVFTPEGVTL
Sequences:
>Translated_298_residues MKKRKEYSKEKKMFLLWLSAAAAMHILLLSGLFFLDVFNQAKQRVPKIINVSLVSLPGTGASAAPRAEGAGRAVTVEKKT VETPQAASRPEQQVKPKESAAIPAPVKKPEKEISEAPAKPKALPVANRKPAQLDKTLDRLKLEVNRKAATQPSRADQLGS ALTKLQDKVRSQGAKGAGSNDREVASSAGGAGGVGKGASGGGVSDPYKVSIASIIQNNWEFSSQLTKNGYGMEVYVSINI LPDGTINEIRFDKRAASEYLNNSVKKALEKSSPLPDLPKKYGASLRIGFVFTPEGVTL >Mature_298_residues MKKRKEYSKEKKMFLLWLSAAAAMHILLLSGLFFLDVFNQAKQRVPKIINVSLVSLPGTGASAAPRAEGAGRAVTVEKKT VETPQAASRPEQQVKPKESAAIPAPVKKPEKEISEAPAKPKALPVANRKPAQLDKTLDRLKLEVNRKAATQPSRADQLGS ALTKLQDKVRSQGAKGAGSNDREVASSAGGAGGVGKGASGGGVSDPYKVSIASIIQNNWEFSSQLTKNGYGMEVYVSINI LPDGTINEIRFDKRAASEYLNNSVKKALEKSSPLPDLPKKYGASLRIGFVFTPEGVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31836; Mature: 31836
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRKEYSKEKKMFLLWLSAAAAMHILLLSGLFFLDVFNQAKQRVPKIINVSLVSLPGTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC ASAAPRAEGAGRAVTVEKKTVETPQAASRPEQQVKPKESAAIPAPVKKPEKEISEAPAKP CCCCCCCCCCCCEEEEEHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCC KALPVANRKPAQLDKTLDRLKLEVNRKAATQPSRADQLGSALTKLQDKVRSQGAKGAGSN CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DREVASSAGGAGGVGKGASGGGVSDPYKVSIASIIQNNWEFSSQLTKNGYGMEVYVSINI CHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEE LPDGTINEIRFDKRAASEYLNNSVKKALEKSSPLPDLPKKYGASLRIGFVFTPEGVTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEECCCCCCC >Mature Secondary Structure MKKRKEYSKEKKMFLLWLSAAAAMHILLLSGLFFLDVFNQAKQRVPKIINVSLVSLPGTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC ASAAPRAEGAGRAVTVEKKTVETPQAASRPEQQVKPKESAAIPAPVKKPEKEISEAPAKP CCCCCCCCCCCCEEEEEHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCC KALPVANRKPAQLDKTLDRLKLEVNRKAATQPSRADQLGSALTKLQDKVRSQGAKGAGSN CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DREVASSAGGAGGVGKGASGGGVSDPYKVSIASIIQNNWEFSSQLTKNGYGMEVYVSINI CHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEE LPDGTINEIRFDKRAASEYLNNSVKKALEKSSPLPDLPKKYGASLRIGFVFTPEGVTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA