Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356660

Identifier: 119356660

GI number: 119356660

Start: 941484

End: 942539

Strand: Reverse

Name: 119356660

Synonym: Cpha266_0829

Alternate gene names: NA

Gene position: 942539-941484 (Counterclockwise)

Preceding gene: 119356661

Following gene: 119356659

Centisome position: 30.08

GC content: 50.38

Gene sequence:

>1056_bases
ATGACCCTGCAACCATCTCTTCACAAAAGAAAAAGCCTGCTTGCCGACACCCGCGAACAGGTCATGGTGCTTGAACAAAC
CGACTGCCATATCGAAAGTTTCAACTCAAAACTTCGCAAAACCGGCGTCGCCCATCTCAATCGGGATGCAACCGCCATTT
TGCAGGTAAACACCGGCTATCGATGCAACCTTCTCTGCCGCCACTGCCATGTCGATGCCGGTCCGGATCGTACCGAGATG
ATGAGCCGCCAAACCATGCAAGACTGCCTCAATGCACTGAAAAACAGCAGCATACGAACGCTCGACATTACCGGTGGTGC
CCCCGAAATGAATCCGGAACTCCCCTGGTTTATCAGGGAAGCAAGAAAAATCATGCCTGAAGGAGAAATTCTGGTAAGAA
CAAATCTTGTGATTCTGGTTTCCGGTACAGGCTATCGACATTTTCCCGAGCTTTTCAAGGAGAACCGGGTTTCACTCATT
GCATCGCTCCCCTGCTACACCCGCCAGAACGTCGATGCCCAGCGAGGTGATGGAGTGTTCGACAGATCGATCGAGGCACT
CCTGCTGCTCAACTCTCTCGGATACGGAAAAAACGGGAGTGGACTCGAACTGAATCTCGTCTATAACCCTGGAGGCCCCT
CTCTTCCGGGAGCGCAGAAGACACTCGAAGCGGATTATAAAATTAAACTTAAAACAGAGTTCGGTGTCGAGTTCAACCAC
CTGTACACCATCACCAACATGCCGGTCAGCAGGTTTCTCGAATCCCTGCTCAAAGAGGAAAACTTTTGTAACTACATGAA
GCTTCTGTCAGATAACTTCAATTCAGAGGCGGTAAAAAATGTTATGTGCCGTACCACTGTTTCTGTCGGCTGGGACGGAA
CGCTCTATGACTGCGATTTCAACCAGATGCTCAAACTACCCATGCGCTCTCCCGCACCAATAAATATCAGGGATTTCGAT
GAGCAACTGCTTGATCAGAGACCTGTCGCTACAGGGCAGCACTGTTACGGCTGCACGGCTGGTGCAGGATCGAGCTGTCA
GGGTTGTCTTTTATAA

Upstream 100 bases:

>100_bases
TCCACAGCTCCCGATATGGAACGATTTAAAGCCAATAACGTTTGTCAGGAACAGAGTGAAAACGATCATTTCAAGGAACA
AACAACTCAGACCATACATC

Downstream 100 bases:

>100_bases
AGGGGCCTTCATGCTCTCCGGTAAACTGCTCATTATTTTTGCCCGCAATCCGGTGCCGGGCAGGGTGAAAACAAGACTTG
CCGCAATAACCGGCAATGAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTLQPSLHKRKSLLADTREQVMVLEQTDCHIESFNSKLRKTGVAHLNRDATAILQVNTGYRCNLLCRHCHVDAGPDRTEM
MSRQTMQDCLNALKNSSIRTLDITGGAPEMNPELPWFIREARKIMPEGEILVRTNLVILVSGTGYRHFPELFKENRVSLI
ASLPCYTRQNVDAQRGDGVFDRSIEALLLLNSLGYGKNGSGLELNLVYNPGGPSLPGAQKTLEADYKIKLKTEFGVEFNH
LYTITNMPVSRFLESLLKEENFCNYMKLLSDNFNSEAVKNVMCRTTVSVGWDGTLYDCDFNQMLKLPMRSPAPINIRDFD
EQLLDQRPVATGQHCYGCTAGAGSSCQGCLL

Sequences:

>Translated_351_residues
MTLQPSLHKRKSLLADTREQVMVLEQTDCHIESFNSKLRKTGVAHLNRDATAILQVNTGYRCNLLCRHCHVDAGPDRTEM
MSRQTMQDCLNALKNSSIRTLDITGGAPEMNPELPWFIREARKIMPEGEILVRTNLVILVSGTGYRHFPELFKENRVSLI
ASLPCYTRQNVDAQRGDGVFDRSIEALLLLNSLGYGKNGSGLELNLVYNPGGPSLPGAQKTLEADYKIKLKTEFGVEFNH
LYTITNMPVSRFLESLLKEENFCNYMKLLSDNFNSEAVKNVMCRTTVSVGWDGTLYDCDFNQMLKLPMRSPAPINIRDFD
EQLLDQRPVATGQHCYGCTAGAGSSCQGCLL
>Mature_350_residues
TLQPSLHKRKSLLADTREQVMVLEQTDCHIESFNSKLRKTGVAHLNRDATAILQVNTGYRCNLLCRHCHVDAGPDRTEMM
SRQTMQDCLNALKNSSIRTLDITGGAPEMNPELPWFIREARKIMPEGEILVRTNLVILVSGTGYRHFPELFKENRVSLIA
SLPCYTRQNVDAQRGDGVFDRSIEALLLLNSLGYGKNGSGLELNLVYNPGGPSLPGAQKTLEADYKIKLKTEFGVEFNHL
YTITNMPVSRFLESLLKEENFCNYMKLLSDNFNSEAVKNVMCRTTVSVGWDGTLYDCDFNQMLKLPMRSPAPINIRDFDE
QLLDQRPVATGQHCYGCTAGAGSSCQGCLL

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39336; Mature: 39204

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQPSLHKRKSLLADTREQVMVLEQTDCHIESFNSKLRKTGVAHLNRDATAILQVNTGY
CCCCCCHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
RCNLLCRHCHVDAGPDRTEMMSRQTMQDCLNALKNSSIRTLDITGGAPEMNPELPWFIRE
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHH
ARKIMPEGEILVRTNLVILVSGTGYRHFPELFKENRVSLIASLPCYTRQNVDAQRGDGVF
HHHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHH
DRSIEALLLLNSLGYGKNGSGLELNLVYNPGGPSLPGAQKTLEADYKIKLKTEFGVEFNH
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCEEEEEEEECCCEEEE
LYTITNMPVSRFLESLLKEENFCNYMKLLSDNFNSEAVKNVMCRTTVSVGWDGTLYDCDF
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCEEEECCH
NQMLKLPMRSPAPINIRDFDEQLLDQRPVATGQHCYGCTAGAGSSCQGCLL
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLQPSLHKRKSLLADTREQVMVLEQTDCHIESFNSKLRKTGVAHLNRDATAILQVNTGY
CCCCCHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
RCNLLCRHCHVDAGPDRTEMMSRQTMQDCLNALKNSSIRTLDITGGAPEMNPELPWFIRE
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHH
ARKIMPEGEILVRTNLVILVSGTGYRHFPELFKENRVSLIASLPCYTRQNVDAQRGDGVF
HHHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHH
DRSIEALLLLNSLGYGKNGSGLELNLVYNPGGPSLPGAQKTLEADYKIKLKTEFGVEFNH
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCEEEEEEEECCCEEEE
LYTITNMPVSRFLESLLKEENFCNYMKLLSDNFNSEAVKNVMCRTTVSVGWDGTLYDCDF
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCEEEECCH
NQMLKLPMRSPAPINIRDFDEQLLDQRPVATGQHCYGCTAGAGSSCQGCLL
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA