| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356654
Identifier: 119356654
GI number: 119356654
Start: 936297
End: 937367
Strand: Direct
Name: 119356654
Synonym: Cpha266_0823
Alternate gene names: NA
Gene position: 936297-937367 (Clockwise)
Preceding gene: 119356653
Following gene: 119356656
Centisome position: 29.88
GC content: 51.17
Gene sequence:
>1071_bases ATGGCAAATCCGGAACATCTGGCAACGCTGCATAAAGGTGTTGAAACCTGGAACCGATGGAGGCAGGAAGAGCGGGTGCT TCGCCCCGATCTCAGCGGCGCTGATCTGTGGGGCGCGAATCTCAGAGGGGTGAATTTCAGCGGTTCGGTTCTTCGCGGAG CAATACTTACCGATGCTGATCTGGGTTCGGCGGATCTTCGGGGAGCCGATTTGAGCGAAGCAAACCTCGGAGGAACTGAT TTGAGTAAAAGTACTATCGATACAGCTACCCGGTATGAAACGGTTATCGGTTGCGATGTCGGTGTGAACGGGTTTTATTC ACAGGCAACCGACTCCGCTGCCCTCATGCGTATCGATCCTCCAGGAAACTCCATGCAGGGCGCCAATGTCAACGCTGTTA TTGAAAGTCTGAACGTCGCCAGAAAACTGCACACGTTTTCCCTGATTCTGGCCGGCATCGCCCTTCTTTTCATTGTCATC AAGCCCAAATCGATAACCTTGCCCTATCTTGCAGGTTCCTTCAGGTTTGATGCGCTCAGTTACGCTTTTCTTGCCACCAT TCTTTCGACAGGAATGTTGATGCTCGTGGCGACCTTTATTGATTCGGCGCTGCAGGGCGTGCGCTATCTGAACGATCGCA GATCAGCCATGACGGTTGCGCACTTCCCCTGGTTGCTCTCGAAATACGAGCATGATCCCGGTGTAAGCCGCAAATCGAGG GTCATGCGTTTTCTGCTCAGCTATCATCCTGTTGTCTATCTCTATTTTTTTGTAAAATGGGAGTCGGTTTTCACAGGAGA CTGGGAGGCCATTGCCCGGCACTATATGGAGCTTCCGGTCATTCTTGCAGAAGTGCTGCTGCCGTTTTTCTTTGTTATGC TGATGATGCTCTGCAGGAACATCTACCGTCTTTCGGAGGGTTTTCAGAAACCTATTCTTTTTGATACCGCAACTGAACGT GACCGGCGGAGCGACATGGAACGACTTGCCGAGGCTGTAGAAAAACAGTCATCAACTATCGGGGTTCTCATACAGCTTCT CGAAGAGAAACGGGGAGTGAAGGAGAGATAA
Upstream 100 bases:
>100_bases ACAGCGCATCGCTTTTCAGGGCAATACTTGTCTATGTTGGTAAAAATCCCTGCTGAAGAGAGCGCGGTCAGGGAGTTTTT CAGGGAAAACCGTTAAGAGT
Downstream 100 bases:
>100_bases CGTTACATTACAGAGTTTCCTGAAAAAAGTGTACTGAAGTTGTTGACGGCCATTTTACCGTGCAGCAGCATTCCTTCGCC GTACATGACGCCGATCTGCT
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MANPEHLATLHKGVETWNRWRQEERVLRPDLSGADLWGANLRGVNFSGSVLRGAILTDADLGSADLRGADLSEANLGGTD LSKSTIDTATRYETVIGCDVGVNGFYSQATDSAALMRIDPPGNSMQGANVNAVIESLNVARKLHTFSLILAGIALLFIVI KPKSITLPYLAGSFRFDALSYAFLATILSTGMLMLVATFIDSALQGVRYLNDRRSAMTVAHFPWLLSKYEHDPGVSRKSR VMRFLLSYHPVVYLYFFVKWESVFTGDWEAIARHYMELPVILAEVLLPFFFVMLMMLCRNIYRLSEGFQKPILFDTATER DRRSDMERLAEAVEKQSSTIGVLIQLLEEKRGVKER
Sequences:
>Translated_356_residues MANPEHLATLHKGVETWNRWRQEERVLRPDLSGADLWGANLRGVNFSGSVLRGAILTDADLGSADLRGADLSEANLGGTD LSKSTIDTATRYETVIGCDVGVNGFYSQATDSAALMRIDPPGNSMQGANVNAVIESLNVARKLHTFSLILAGIALLFIVI KPKSITLPYLAGSFRFDALSYAFLATILSTGMLMLVATFIDSALQGVRYLNDRRSAMTVAHFPWLLSKYEHDPGVSRKSR VMRFLLSYHPVVYLYFFVKWESVFTGDWEAIARHYMELPVILAEVLLPFFFVMLMMLCRNIYRLSEGFQKPILFDTATER DRRSDMERLAEAVEKQSSTIGVLIQLLEEKRGVKER >Mature_355_residues ANPEHLATLHKGVETWNRWRQEERVLRPDLSGADLWGANLRGVNFSGSVLRGAILTDADLGSADLRGADLSEANLGGTDL SKSTIDTATRYETVIGCDVGVNGFYSQATDSAALMRIDPPGNSMQGANVNAVIESLNVARKLHTFSLILAGIALLFIVIK PKSITLPYLAGSFRFDALSYAFLATILSTGMLMLVATFIDSALQGVRYLNDRRSAMTVAHFPWLLSKYEHDPGVSRKSRV MRFLLSYHPVVYLYFFVKWESVFTGDWEAIARHYMELPVILAEVLLPFFFVMLMMLCRNIYRLSEGFQKPILFDTATERD RRSDMERLAEAVEKQSSTIGVLIQLLEEKRGVKER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39856; Mature: 39724
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPEHLATLHKGVETWNRWRQEERVLRPDLSGADLWGANLRGVNFSGSVLRGAILTDAD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCC LGSADLRGADLSEANLGGTDLSKSTIDTATRYETVIGCDVGVNGFYSQATDSAALMRIDP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCEEEEECC PGNSMQGANVNAVIESLNVARKLHTFSLILAGIALLFIVIKPKSITLPYLAGSFRFDALS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHCCCHHHHHHH YAFLATILSTGMLMLVATFIDSALQGVRYLNDRRSAMTVAHFPWLLSKYEHDPGVSRKSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VMRFLLSYHPVVYLYFFVKWESVFTGDWEAIARHYMELPVILAEVLLPFFFVMLMMLCRN HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYRLSEGFQKPILFDTATERDRRSDMERLAEAVEKQSSTIGVLIQLLEEKRGVKER HHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ANPEHLATLHKGVETWNRWRQEERVLRPDLSGADLWGANLRGVNFSGSVLRGAILTDAD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCC LGSADLRGADLSEANLGGTDLSKSTIDTATRYETVIGCDVGVNGFYSQATDSAALMRIDP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCEEEEECC PGNSMQGANVNAVIESLNVARKLHTFSLILAGIALLFIVIKPKSITLPYLAGSFRFDALS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHCCCHHHHHHH YAFLATILSTGMLMLVATFIDSALQGVRYLNDRRSAMTVAHFPWLLSKYEHDPGVSRKSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VMRFLLSYHPVVYLYFFVKWESVFTGDWEAIARHYMELPVILAEVLLPFFFVMLMMLCRN HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYRLSEGFQKPILFDTATERDRRSDMERLAEAVEKQSSTIGVLIQLLEEKRGVKER HHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA