| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is nadA
Identifier: 119356652
GI number: 119356652
Start: 934487
End: 935458
Strand: Direct
Name: nadA
Synonym: Cpha266_0821
Alternate gene names: 119356652
Gene position: 934487-935458 (Clockwise)
Preceding gene: 119356651
Following gene: 119356653
Centisome position: 29.82
GC content: 50.72
Gene sequence:
>972_bases ATGACTTCCTATTCACTACCTTTCAAGAGCAGCGGCAAGGAGATGGCAGCTTCCGGAGAACTGGCCGGAAAGATTGGCCT TTTGAAAAAAGAGATGAACGCCATCGTTCTTGCCCACTATTACACGCTGCCGGAAATTCAGCAGGTTGCCGATGTTGTGG GTGACAGCCTTGCGCTTGCGCGTGCTGCCGAAAAAAACAGCGCTGATGTGATTGTTTTTGCCGGCGTCTACTTCATGGCC GAGACGGCAAAAATTATCAACCCCGACAAGCTTGTACTCATGCCGGATCTCTATGCGGGCTGTCCTCTTGCAGACAGTTG TCCTGTCGGCGAGTTCAGAGCATTTAAACAACGGCATCCGGATGCTCTTGTTATAACGTATATCAACTCAACGGCTGAAA TCAAGTCGCTCTCCGATATTACCTGCACCTCATCCAATGCCGAGCATATCATTCGGCAGATACCGGAAGAGCGGACAATT ATTTTTGGCCCCGATCGCAACCTCGGAGGCTACATCATGAAAAAACTCGGCAGGGAGATGCTGCTCTGGCAGGGATTCTG CTATGTACATGAGGCATTTCGTGAAGCATGCATTCTGCAGGCATGCAGGGAAAACCCTCAAGCCGAATTGATTGCCCATC CGGAATGTCGCGAGGAGGTCTTGCGCCATGCTGCTTTCATCGGATCAACCCAGGCTCTTCTTGATTATACGGTTTCAGCC CCGGCGTCATCGTTTATTGTAGCTACTGAACCCGGTATTCTCTACGAAATGCAGCGCCGTTCGCCGAAAAAGCAGTTTAT TGCGGCTCCCAAAGACCCGGAGAACCCGAGAAGCGTCTGTAAGCAGATGAAGCAGAACACTCTCGAAAAGCTCTACCAGT GCATGCTCGACAGGTCGCCTGAAATTATCGTGCCGGATGACCTTCGGGTTCTTGCGCTCAGACCCATCAAAAAAATGCTT GAAATGTCATGA
Upstream 100 bases:
>100_bases TGAAGACTATCTGAAATAGCAGTTAAAGGTCATCTGCTCAATGGAGCTTTTGGCAACTTTGCTTTAAAATATTCCCGTTG AAATTTATTGCAACTACCCT
Downstream 100 bases:
>100_bases AAGGATTTTGCTGAAAAAATCGGGGCTTTCTTTTTTGTTATCAAATCCATCATCCATTCATTCCTGGAGAGCATACCATG CAGGAACATAAACAAAACGG
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTSYSLPFKSSGKEMAASGELAGKIGLLKKEMNAIVLAHYYTLPEIQQVADVVGDSLALARAAEKNSADVIVFAGVYFMA ETAKIINPDKLVLMPDLYAGCPLADSCPVGEFRAFKQRHPDALVITYINSTAEIKSLSDITCTSSNAEHIIRQIPEERTI IFGPDRNLGGYIMKKLGREMLLWQGFCYVHEAFREACILQACRENPQAELIAHPECREEVLRHAAFIGSTQALLDYTVSA PASSFIVATEPGILYEMQRRSPKKQFIAAPKDPENPRSVCKQMKQNTLEKLYQCMLDRSPEIIVPDDLRVLALRPIKKML EMS
Sequences:
>Translated_323_residues MTSYSLPFKSSGKEMAASGELAGKIGLLKKEMNAIVLAHYYTLPEIQQVADVVGDSLALARAAEKNSADVIVFAGVYFMA ETAKIINPDKLVLMPDLYAGCPLADSCPVGEFRAFKQRHPDALVITYINSTAEIKSLSDITCTSSNAEHIIRQIPEERTI IFGPDRNLGGYIMKKLGREMLLWQGFCYVHEAFREACILQACRENPQAELIAHPECREEVLRHAAFIGSTQALLDYTVSA PASSFIVATEPGILYEMQRRSPKKQFIAAPKDPENPRSVCKQMKQNTLEKLYQCMLDRSPEIIVPDDLRVLALRPIKKML EMS >Mature_322_residues TSYSLPFKSSGKEMAASGELAGKIGLLKKEMNAIVLAHYYTLPEIQQVADVVGDSLALARAAEKNSADVIVFAGVYFMAE TAKIINPDKLVLMPDLYAGCPLADSCPVGEFRAFKQRHPDALVITYINSTAEIKSLSDITCTSSNAEHIIRQIPEERTII FGPDRNLGGYIMKKLGREMLLWQGFCYVHEAFREACILQACRENPQAELIAHPECREEVLRHAAFIGSTQALLDYTVSAP ASSFIVATEPGILYEMQRRSPKKQFIAAPKDPENPRSVCKQMKQNTLEKLYQCMLDRSPEIIVPDDLRVLALRPIKKMLE MS
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1786964, Length=311, Percent_Identity=39.871382636656, Blast_Score=218, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADA_CHLPD (A1BEP5)
Other databases:
- EMBL: CP000492 - RefSeq: YP_911296.1 - ProteinModelPortal: A1BEP5 - SMR: A1BEP5 - STRING: A1BEP5 - GeneID: 4570319 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0821 - NMPDR: fig|290317.7.peg.871 - eggNOG: COG0379 - HOGENOM: HBG291157 - OMA: SMARMID - ProtClustDB: PRK09375 - GO: GO:0005737 - HAMAP: MF_00568 - InterPro: IPR003473 - InterPro: IPR023066 - TIGRFAMs: TIGR00550
Pfam domain/function: PF02445 NadA
EC number: =2.5.1.72
Molecular weight: Translated: 35973; Mature: 35842
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: BINDING 39-39 BINDING 56-56 BINDING 127-127 BINDING 144-144 BINDING 213-213 BINDING 230-230
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYSLPFKSSGKEMAASGELAGKIGLLKKEMNAIVLAHYYTLPEIQQVADVVGDSLALA CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCEEEEEEHHCCHHHHHHHHHHCCHHHHH RAAEKNSADVIVFAGVYFMAETAKIINPDKLVLMPDLYAGCPLADSCPVGEFRAFKQRHP HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCC DALVITYINSTAEIKSLSDITCTSSNAEHIIRQIPEERTIIFGPDRNLGGYIMKKLGREM CEEEEEEECCCHHHHCCCCCEECCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH LLWQGFCYVHEAFREACILQACRENPQAELIAHPECREEVLRHAAFIGSTQALLDYTVSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCC PASSFIVATEPGILYEMQRRSPKKQFIAAPKDPENPRSVCKQMKQNTLEKLYQCMLDRSP CCCCEEEECCCCHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EIIVPDDLRVLALRPIKKMLEMS CEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TSYSLPFKSSGKEMAASGELAGKIGLLKKEMNAIVLAHYYTLPEIQQVADVVGDSLALA CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCEEEEEEHHCCHHHHHHHHHHCCHHHHH RAAEKNSADVIVFAGVYFMAETAKIINPDKLVLMPDLYAGCPLADSCPVGEFRAFKQRHP HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCC DALVITYINSTAEIKSLSDITCTSSNAEHIIRQIPEERTIIFGPDRNLGGYIMKKLGREM CEEEEEEECCCHHHHCCCCCEECCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH LLWQGFCYVHEAFREACILQACRENPQAELIAHPECREEVLRHAAFIGSTQALLDYTVSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCC PASSFIVATEPGILYEMQRRSPKKQFIAAPKDPENPRSVCKQMKQNTLEKLYQCMLDRSP CCCCEEEECCCCHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EIIVPDDLRVLALRPIKKMLEMS CEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA