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The map label for this gene is dedA [H]

Identifier: 119356643

GI number: 119356643

Start: 925857

End: 926471

Strand: Reverse

Name: dedA [H]

Synonym: Cpha266_0812

Alternate gene names: 119356643

Gene position: 926471-925857 (Counterclockwise)

Preceding gene: 119356644

Following gene: 119356642

Centisome position: 29.56

GC content: 45.69

Gene sequence:

>615_bases
ATGATTTTTCTTATGCCGCTGCAGACTGTGCGATCCCTTGATGAACTTATTCTCTGGGGCGGCTATATTCTTCTTTTCGC
TGTAATTTTTTCAGAAACAGGTCTGTTTGCAGGCTTTTTTCTCCCGGGCGACTCACTGCTCATAACCGCAGGACTCATCG
CCGCTTCAGGAGATCTCGACATCAGGGCAGTCATCGCAACGCTTATTGCCGGCGCTGTTTGTGGCGACTCAACCGGATAT
CTCATTGGGCGCCAACTGCAAAAGAATTTTTTCAAAAAAGAGGATTCCAGATTCTTTCACCGTAAGCATCTTCAAAAAAC
AGAGGCTTTTTATCAAAAACATGGGGCAAAAGCTGTTTTTCTTGCGCGATTTATACCGGTACTCCGCAGTTTTGCCGCAA
CACTTGCGGGAGTTACCGTTATGCCCTACAGGGTATTTCTCTTTTACAGTGTTTCCGGAGCAATTATCTGGGTACTTTGT
TTTACTTTTACTGGATACTTTATTGCAAGCGTCTTCCCTGACGTTGTCACCTATCTGCACTCCATCATACTCGTAGGGAT
AGTGCTGATAATCCTCAGCGCGCTGCGCCAACTCAGACCGGTAAAAAATTCATGA

Upstream 100 bases:

>100_bases
ACCAGTTATCTTGAGATAACACGGGGAACAGGACCGGTATTGCCTGTTCCCCGTCCCTGTTTCTGACACAACTGAACAAA
TCCCCAACTCCTGAGTACCC

Downstream 100 bases:

>100_bases
ACATTTTTTTAACAACTGCGATATGACCGAATCGATCAATACAGACGTCCTTGTCATCGGAAGTGGAATCGGAGGGCTTT
ATTTCGCCATCCATATGGCT

Product: DedA family protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MIFLMPLQTVRSLDELILWGGYILLFAVIFSETGLFAGFFLPGDSLLITAGLIAASGDLDIRAVIATLIAGAVCGDSTGY
LIGRQLQKNFFKKEDSRFFHRKHLQKTEAFYQKHGAKAVFLARFIPVLRSFAATLAGVTVMPYRVFLFYSVSGAIIWVLC
FTFTGYFIASVFPDVVTYLHSIILVGIVLIILSALRQLRPVKNS

Sequences:

>Translated_204_residues
MIFLMPLQTVRSLDELILWGGYILLFAVIFSETGLFAGFFLPGDSLLITAGLIAASGDLDIRAVIATLIAGAVCGDSTGY
LIGRQLQKNFFKKEDSRFFHRKHLQKTEAFYQKHGAKAVFLARFIPVLRSFAATLAGVTVMPYRVFLFYSVSGAIIWVLC
FTFTGYFIASVFPDVVTYLHSIILVGIVLIILSALRQLRPVKNS
>Mature_204_residues
MIFLMPLQTVRSLDELILWGGYILLFAVIFSETGLFAGFFLPGDSLLITAGLIAASGDLDIRAVIATLIAGAVCGDSTGY
LIGRQLQKNFFKKEDSRFFHRKHLQKTEAFYQKHGAKAVFLARFIPVLRSFAATLAGVTVMPYRVFLFYSVSGAIIWVLC
FTFTGYFIASVFPDVVTYLHSIILVGIVLIILSALRQLRPVKNS

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=171, Percent_Identity=42.6900584795322, Blast_Score=145, Evalue=1e-36,
Organism=Escherichia coli, GI1789384, Length=150, Percent_Identity=34.6666666666667, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789481, Length=155, Percent_Identity=30.9677419354839, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI87082056, Length=153, Percent_Identity=25.4901960784314, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22625; Mature: 22625

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLMPLQTVRSLDELILWGGYILLFAVIFSETGLFAGFFLPGDSLLITAGLIAASGDLD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCCCCCH
IRAVIATLIAGAVCGDSTGYLIGRQLQKNFFKKEDSRFFHRKHLQKTEAFYQKHGAKAVF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LARFIPVLRSFAATLAGVTVMPYRVFLFYSVSGAIIWVLCFTFTGYFIASVFPDVVTYLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIILVGIVLIILSALRQLRPVKNS
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIFLMPLQTVRSLDELILWGGYILLFAVIFSETGLFAGFFLPGDSLLITAGLIAASGDLD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCCCCCH
IRAVIATLIAGAVCGDSTGYLIGRQLQKNFFKKEDSRFFHRKHLQKTEAFYQKHGAKAVF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LARFIPVLRSFAATLAGVTVMPYRVFLFYSVSGAIIWVLCFTFTGYFIASVFPDVVTYLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIILVGIVLIILSALRQLRPVKNS
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]