| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356570
Identifier: 119356570
GI number: 119356570
Start: 836881
End: 837189
Strand: Reverse
Name: 119356570
Synonym: Cpha266_0736
Alternate gene names: NA
Gene position: 837189-836881 (Counterclockwise)
Preceding gene: 119356571
Following gene: 119356569
Centisome position: 26.71
GC content: 47.57
Gene sequence:
>309_bases ATGGACAAACCAAAACATCACATTTTCGTCTGCGGAAGTTTCCGCGCTCAGGGCACGCCTCAGGGAATCTGTCATAAAAA AGAGTCGCTCAGCCTGATACCCTATTTTGAAAGCGAGCTGTCCGACAGGGGAATGAGCGACGTTGCTGTATCGGCAACAG GGTGCCTCAACATCTGTGAAAAAGGACCTGTTGTCGTGATCTATCCTGAAAATTTCTGGTATGGAGAGGTCGACAGCGAA GAAAAAGTTGATGAAATTCTTGACGCTCTCGAAGAGGGCGAAGCCTGTGAAACGCATTTGATCAACTAA
Upstream 100 bases:
>100_bases TTCTGACATTAATTATGCACCGGAAAAAAAGAGGTTGAGCATTGTGATTTGAAATCAAAAAATTCAACATCATTTTTTAA TAACACTCAAGAACACCATC
Downstream 100 bases:
>100_bases AAAACTTTCAATAGGCAGCGGCGCTTCCCCGGTAAAAAATACTGGCAAGTGCCGCAGCGCCTCTGCTGCTCATAAAAAGC CCCGGCAAAAACCGCCCTTG
Product: ferredoxin, 2Fe-2S
Products: NA
Alternate protein names: 2FeCpFd [H]
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDKPKHHIFVCGSFRAQGTPQGICHKKESLSLIPYFESELSDRGMSDVAVSATGCLNICEKGPVVVIYPENFWYGEVDSE EKVDEILDALEEGEACETHLIN
Sequences:
>Translated_102_residues MDKPKHHIFVCGSFRAQGTPQGICHKKESLSLIPYFESELSDRGMSDVAVSATGCLNICEKGPVVVIYPENFWYGEVDSE EKVDEILDALEEGEACETHLIN >Mature_102_residues MDKPKHHIFVCGSFRAQGTPQGICHKKESLSLIPYFESELSDRGMSDVAVSATGCLNICEKGPVVVIYPENFWYGEVDSE EKVDEILDALEEGEACETHLIN
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002023 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01257 Complex1_24kDa [H]
EC number: NA
Molecular weight: Translated: 11333; Mature: 11333
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPKHHIFVCGSFRAQGTPQGICHKKESLSLIPYFESELSDRGMSDVAVSATGCLNICE CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCCCEEEECCHHHHHCC KGPVVVIYPENFWYGEVDSEEKVDEILDALEEGEACETHLIN CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDKPKHHIFVCGSFRAQGTPQGICHKKESLSLIPYFESELSDRGMSDVAVSATGCLNICE CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCCCEEEECCHHHHHCC KGPVVVIYPENFWYGEVDSEEKVDEILDALEEGEACETHLIN CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3790505; 7916603; 8334159; 8392833 [H]