| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356561
Identifier: 119356561
GI number: 119356561
Start: 829084
End: 829506
Strand: Reverse
Name: 119356561
Synonym: Cpha266_0727
Alternate gene names: NA
Gene position: 829506-829084 (Counterclockwise)
Preceding gene: 119356562
Following gene: 119356560
Centisome position: 26.47
GC content: 45.63
Gene sequence:
>423_bases ATGAATCATGATCTCCTTTTTGCTGTTGCCAAATTCAATCGGCTCCGAACAGCCCCGTTATCTGCTCACGCTGTTCATAG CGAACAAAAAGAGGAAGCTGCCGACCCGTCAAGACAAAGCACGTTAACGAGCAATGCCCTTTACCGTCATACGTTGAGAA CGTATCGGAACAGAGTTCAGGCACAGAGCAACGAAGCGATCAAATCGATGACCGGCCGTCAGAAGCGACTATCCCGAAAC AAAACCGGCAATAAGTATCACCGTGATTCAGGGGTATGCTTTTGCAGGAGTTGGTCTGGAGATGCAATTAAAAATAAATC AGGAAATGAAAAGCAGGCAGACAAGAAACCGCTGAAAAGGATTTCCGGAAATCAACACGTTCCTGTTAATCAAGAAAAAA TAAGCTCTGCTTGCGTGTCTTGA
Upstream 100 bases:
>100_bases CATGGAAATCAGAAAGATTCCCGTTCAGCGCGACCCGCACTGCCCCCTCTGTGGAACGGCGTAACACCGATCCTTTACGT TGCAGCAACATCCCCTGAGA
Downstream 100 bases:
>100_bases CGCTGATGCAGTCAAAGGATAGAATAAAACGCGACGTCACGAACCAATCTTCGTAAAAGCAGAATAAAAGAGAAGTGCCC TTCACAAGGTATACGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNHDLLFAVAKFNRLRTAPLSAHAVHSEQKEEAADPSRQSTLTSNALYRHTLRTYRNRVQAQSNEAIKSMTGRQKRLSRN KTGNKYHRDSGVCFCRSWSGDAIKNKSGNEKQADKKPLKRISGNQHVPVNQEKISSACVS
Sequences:
>Translated_140_residues MNHDLLFAVAKFNRLRTAPLSAHAVHSEQKEEAADPSRQSTLTSNALYRHTLRTYRNRVQAQSNEAIKSMTGRQKRLSRN KTGNKYHRDSGVCFCRSWSGDAIKNKSGNEKQADKKPLKRISGNQHVPVNQEKISSACVS >Mature_140_residues MNHDLLFAVAKFNRLRTAPLSAHAVHSEQKEEAADPSRQSTLTSNALYRHTLRTYRNRVQAQSNEAIKSMTGRQKRLSRN KTGNKYHRDSGVCFCRSWSGDAIKNKSGNEKQADKKPLKRISGNQHVPVNQEKISSACVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15778; Mature: 15778
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHDLLFAVAKFNRLRTAPLSAHAVHSEQKEEAADPSRQSTLTSNALYRHTLRTYRNRVQ CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AQSNEAIKSMTGRQKRLSRNKTGNKYHRDSGVCFCRSWSGDAIKNKSGNEKQADKKPLKR HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH ISGNQHVPVNQEKISSACVS HCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNHDLLFAVAKFNRLRTAPLSAHAVHSEQKEEAADPSRQSTLTSNALYRHTLRTYRNRVQ CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AQSNEAIKSMTGRQKRLSRNKTGNKYHRDSGVCFCRSWSGDAIKNKSGNEKQADKKPLKR HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH ISGNQHVPVNQEKISSACVS HCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA