| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356461
Identifier: 119356461
GI number: 119356461
Start: 703023
End: 704282
Strand: Reverse
Name: 119356461
Synonym: Cpha266_0626
Alternate gene names: NA
Gene position: 704282-703023 (Counterclockwise)
Preceding gene: 119356475
Following gene: 119356460
Centisome position: 22.47
GC content: 49.37
Gene sequence:
>1260_bases ATGATCGTAGACAACTTCAGGTTACAATTAGGAAAACAAGAGTACGTTCCTCTCGTCATCGGAGGCATGGGAGTCAACAT ATCAACAACCGAACTTGCGCTCGCTGCTGAAAGACTCGGCGGCATAGGCCATATTTCGGATGCCGAGACGGGATATGTCT GTGATCAATTATTTGGAACATCCTTTGTCAGCACAAAAAGAAAACGGTACATCGACAACATCAACAACCCCGACAAGGCG AAAGTCCTTTTTGACCTTGGAGAAGTAGCCGAAGCCCAAAAAAAATACATCGAGCATACCGTTTCGCAAAAAACCGGAAA GGGCGCGATTTTTTTGAACTGCATGGAAAAACTGACGATGAACAATGCGCAGGAAACCCTGAAAGTTCGCCTCGCTGCCG CAATGGATGCCGGAATTGACGGTCTGACCCTCGCTGCCGGCCTGAATCTGAGAACTCTTGATCTGATTCAGGACCATCCC CGCTTCCGCGATGTTAAAATCGGGATTATCATCTCGTCGGTCAGGGCCCTGTCGATCTTTCTGAAACGGGCAGTTCGTCT TCAGCGGTTGCCCGAATATATTATCGTTGAAGGACCTCTGGCTGGCGGGCATCTGGGATTCAGCCCTGATGACTGGCATA CTTTCGATTTAAAAACAATTTTTAATGAAGTGATCCAGTTTCTCAAGCAAGAGAATCTGGCAATTCCCGTTATTCCTGCC GGTGGCATTTTCACCGGAACTGATGCCGCCGAGTATCTTGCCGCAGGAGCTTCCGCTGTTCAGGTTGCAACCCGTTTTAC CATTTCCAAAGAGGCCGGACTGCCGGCAAAAGTCAAGCAGCACTACATCAATGCCACCGAGGAGGACATTGTCGTCAATA TGGCATCAACGACCGGCTACCCGATGCGCATGCTCATACAGTCTCCAACTCTCGACTATACCATGAGACCTAACTGTGAG GGGCTTGGCTATCTGCTGGAAAACGGAGGAAAATGCAGTTATATCGACGCCTATCAGAAAGCTCTTGAGTCAAGAAAATC CGGAGAAAAACTGGCAATCGGTGAAAAAACATGCCTCTGTACCGGAATGGCGAATTACGACTGCTGGACATGCGGTCATA TGGCTTACCGCCTCAAGGAGACCACGAACCGCCTTCATGACGGATCATGGCAGCTCCCTGCGGCAGAAGACATCTTTCTC GATTACCAGTTCAGCAGAGATCACCAGATTCGTCTTCCAGAGCCCGAAGAAAACGCATAG
Upstream 100 bases:
>100_bases TAAATAATTTTTCGAATTGCATTCAGAGGGGATTTTCAGCAATTCGGAGTGTTAGAGATAACTGCAGGCTATAAAAGCTT TGTTACCGGACAAAAAAACA
Downstream 100 bases:
>100_bases ATGTTTTTTTAGGAAAGAACGTGTACATTGCTTTAAGGCAGCACCTTTCGAACGGCTGAAAACACTTAATGCGGGTTGCC GTTATGAAAAAAAAAATATA
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MIVDNFRLQLGKQEYVPLVIGGMGVNISTTELALAAERLGGIGHISDAETGYVCDQLFGTSFVSTKRKRYIDNINNPDKA KVLFDLGEVAEAQKKYIEHTVSQKTGKGAIFLNCMEKLTMNNAQETLKVRLAAAMDAGIDGLTLAAGLNLRTLDLIQDHP RFRDVKIGIIISSVRALSIFLKRAVRLQRLPEYIIVEGPLAGGHLGFSPDDWHTFDLKTIFNEVIQFLKQENLAIPVIPA GGIFTGTDAAEYLAAGASAVQVATRFTISKEAGLPAKVKQHYINATEEDIVVNMASTTGYPMRMLIQSPTLDYTMRPNCE GLGYLLENGGKCSYIDAYQKALESRKSGEKLAIGEKTCLCTGMANYDCWTCGHMAYRLKETTNRLHDGSWQLPAAEDIFL DYQFSRDHQIRLPEPEENA
Sequences:
>Translated_419_residues MIVDNFRLQLGKQEYVPLVIGGMGVNISTTELALAAERLGGIGHISDAETGYVCDQLFGTSFVSTKRKRYIDNINNPDKA KVLFDLGEVAEAQKKYIEHTVSQKTGKGAIFLNCMEKLTMNNAQETLKVRLAAAMDAGIDGLTLAAGLNLRTLDLIQDHP RFRDVKIGIIISSVRALSIFLKRAVRLQRLPEYIIVEGPLAGGHLGFSPDDWHTFDLKTIFNEVIQFLKQENLAIPVIPA GGIFTGTDAAEYLAAGASAVQVATRFTISKEAGLPAKVKQHYINATEEDIVVNMASTTGYPMRMLIQSPTLDYTMRPNCE GLGYLLENGGKCSYIDAYQKALESRKSGEKLAIGEKTCLCTGMANYDCWTCGHMAYRLKETTNRLHDGSWQLPAAEDIFL DYQFSRDHQIRLPEPEENA >Mature_419_residues MIVDNFRLQLGKQEYVPLVIGGMGVNISTTELALAAERLGGIGHISDAETGYVCDQLFGTSFVSTKRKRYIDNINNPDKA KVLFDLGEVAEAQKKYIEHTVSQKTGKGAIFLNCMEKLTMNNAQETLKVRLAAAMDAGIDGLTLAAGLNLRTLDLIQDHP RFRDVKIGIIISSVRALSIFLKRAVRLQRLPEYIIVEGPLAGGHLGFSPDDWHTFDLKTIFNEVIQFLKQENLAIPVIPA GGIFTGTDAAEYLAAGASAVQVATRFTISKEAGLPAKVKQHYINATEEDIVVNMASTTGYPMRMLIQSPTLDYTMRPNCE GLGYLLENGGKCSYIDAYQKALESRKSGEKLAIGEKTCLCTGMANYDCWTCGHMAYRLKETTNRLHDGSWQLPAAEDIFL DYQFSRDHQIRLPEPEENA
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46279; Mature: 46279
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDNFRLQLGKQEYVPLVIGGMGVNISTTELALAAERLGGIGHISDAETGYVCDQLFGT CCCCCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC SFVSTKRKRYIDNINNPDKAKVLFDLGEVAEAQKKYIEHTVSQKTGKGAIFLNCMEKLTM HHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHC NNAQETLKVRLAAAMDAGIDGLTLAAGLNLRTLDLIQDHPRFRDVKIGIIISSVRALSIF CCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHCCCCCCEEEEEEEHHHHHHHHHH LKRAVRLQRLPEYIIVEGPLAGGHLGFSPDDWHTFDLKTIFNEVIQFLKQENLAIPVIPA HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECC GGIFTGTDAAEYLAAGASAVQVATRFTISKEAGLPAKVKQHYINATEEDIVVNMASTTGY CCCEECCCHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCC PMRMLIQSPTLDYTMRPNCEGLGYLLENGGKCSYIDAYQKALESRKSGEKLAIGEKTCLC CEEEEEECCCCCEEECCCCCCCHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEECCCEEEE TGMANYDCWTCGHMAYRLKETTNRLHDGSWQLPAAEDIFLDYQFSRDHQIRLPEPEENA ECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCC >Mature Secondary Structure MIVDNFRLQLGKQEYVPLVIGGMGVNISTTELALAAERLGGIGHISDAETGYVCDQLFGT CCCCCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC SFVSTKRKRYIDNINNPDKAKVLFDLGEVAEAQKKYIEHTVSQKTGKGAIFLNCMEKLTM HHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHC NNAQETLKVRLAAAMDAGIDGLTLAAGLNLRTLDLIQDHPRFRDVKIGIIISSVRALSIF CCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHCCCCCCEEEEEEEHHHHHHHHHH LKRAVRLQRLPEYIIVEGPLAGGHLGFSPDDWHTFDLKTIFNEVIQFLKQENLAIPVIPA HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECC GGIFTGTDAAEYLAAGASAVQVATRFTISKEAGLPAKVKQHYINATEEDIVVNMASTTGY CCCEECCCHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCC PMRMLIQSPTLDYTMRPNCEGLGYLLENGGKCSYIDAYQKALESRKSGEKLAIGEKTCLC CEEEEEECCCCCEEECCCCCCCHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEECCCEEEE TGMANYDCWTCGHMAYRLKETTNRLHDGSWQLPAAEDIFLDYQFSRDHQIRLPEPEENA ECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA