| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356460
Identifier: 119356460
GI number: 119356460
Start: 701917
End: 702939
Strand: Reverse
Name: 119356460
Synonym: Cpha266_0625
Alternate gene names: NA
Gene position: 702939-701917 (Counterclockwise)
Preceding gene: 119356461
Following gene: 119356458
Centisome position: 22.43
GC content: 46.33
Gene sequence:
>1023_bases ATGAAAAAAAAAATATACGCCCTGCTTCTGCCCCTTGCTGTGACAGGAGTTTTCATGGTTGTGGTTTTCACCGTTAATCA GCTTCTTTTCCTTGCCTCTTTTCTCGGCAACATTCACCCTTCGGTAAAATACCTGTTTCTCATTCTCGGATGTTTGCTCC CCGCCTACGCAATTTTCGCGTTGTTCCGATTTTTCTCATCCCCATCAAAACCGGAGCTCCCTGAGAGCGAAACGTCAAAA CAAATTCAGAACTACCTCGAGTATCTTTCAAAAAACATCCCGACGCATCATATGCATCCGGAGCCGCTCAGAAAAGAAAA AGATCTTCGCTGGCTGCGCACAAACCTCAAGTTGCTCGAAGTTGACTCGCTGCACCAGACCAAACAGATCGCTACCAGGA ATTTTTTTGTGGGGGCATTTGCGCAGAACACCTCATACGGAACGACAACATCCCTGATAAACATGCTCAAGGTGGTCTGG AAAATCTATACCATTCACCACAGTGAACACCATCCAATGGAATTTGCAGCACTCTTTCGTTCGGTATACAGATGTCTGCC ACTGTCAGACTTCAAAAAAGAGGATATACCTGCGCATATTAAACCAATCATTCAGTCCTCGTTCAGCAACACGCTCTCAT CACTGCTTCCGGGAGGTAACCTGCTGACACCTTTTTTTCTGAATCTGTTTCTGGCCGGATCGACCAACACCTACCTCACC TGTCTTGCGGGAATCATTGCAACAAGGCACTGCCAGACGATATCGGAAGAGGATCGAAGCGTCATCATTCAACAGAGTAT GTTTGAGGCCTCATTCATGCTGAAAGAGATTGTCCGGCAGTGCAACCCGATATTATCGGTAACCATCAGCAATGCCGTCA AAAAAGCAGGAATCGAAAGCCTTGACACCGTTCAGTCTCCATCGTCAGGAAGCACAATAGCTCAAGACATTGTCTCGCAC CTTGCCATCTCGCTGAAGCAGATCATCAGAGAAAATATCACCACTGAAAAAAAAGGGGATTGA
Upstream 100 bases:
>100_bases CCGAAGAAAACGCATAGATGTTTTTTTAGGAAAGAACGTGTACATTGCTTTAAGGCAGCACCTTTCGAACGGCTGAAAAC ACTTAATGCGGGTTGCCGTT
Downstream 100 bases:
>100_bases TGCGCAGAATACATGGCAAAAGCAAACGAACAGTTCCTCCGATGCATCTGAATACCTTAACGCGACCGGCCTCTCAGCTC TCTGAAAAAATCCTGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKKKIYALLLPLAVTGVFMVVVFTVNQLLFLASFLGNIHPSVKYLFLILGCLLPAYAIFALFRFFSSPSKPELPESETSK QIQNYLEYLSKNIPTHHMHPEPLRKEKDLRWLRTNLKLLEVDSLHQTKQIATRNFFVGAFAQNTSYGTTTSLINMLKVVW KIYTIHHSEHHPMEFAALFRSVYRCLPLSDFKKEDIPAHIKPIIQSSFSNTLSSLLPGGNLLTPFFLNLFLAGSTNTYLT CLAGIIATRHCQTISEEDRSVIIQQSMFEASFMLKEIVRQCNPILSVTISNAVKKAGIESLDTVQSPSSGSTIAQDIVSH LAISLKQIIRENITTEKKGD
Sequences:
>Translated_340_residues MKKKIYALLLPLAVTGVFMVVVFTVNQLLFLASFLGNIHPSVKYLFLILGCLLPAYAIFALFRFFSSPSKPELPESETSK QIQNYLEYLSKNIPTHHMHPEPLRKEKDLRWLRTNLKLLEVDSLHQTKQIATRNFFVGAFAQNTSYGTTTSLINMLKVVW KIYTIHHSEHHPMEFAALFRSVYRCLPLSDFKKEDIPAHIKPIIQSSFSNTLSSLLPGGNLLTPFFLNLFLAGSTNTYLT CLAGIIATRHCQTISEEDRSVIIQQSMFEASFMLKEIVRQCNPILSVTISNAVKKAGIESLDTVQSPSSGSTIAQDIVSH LAISLKQIIRENITTEKKGD >Mature_340_residues MKKKIYALLLPLAVTGVFMVVVFTVNQLLFLASFLGNIHPSVKYLFLILGCLLPAYAIFALFRFFSSPSKPELPESETSK QIQNYLEYLSKNIPTHHMHPEPLRKEKDLRWLRTNLKLLEVDSLHQTKQIATRNFFVGAFAQNTSYGTTTSLINMLKVVW KIYTIHHSEHHPMEFAALFRSVYRCLPLSDFKKEDIPAHIKPIIQSSFSNTLSSLLPGGNLLTPFFLNLFLAGSTNTYLT CLAGIIATRHCQTISEEDRSVIIQQSMFEASFMLKEIVRQCNPILSVTISNAVKKAGIESLDTVQSPSSGSTIAQDIVSH LAISLKQIIRENITTEKKGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38291; Mature: 38291
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIYALLLPLAVTGVFMVVVFTVNQLLFLASFLGNIHPSVKYLFLILGCLLPAYAIFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFRFFSSPSKPELPESETSKQIQNYLEYLSKNIPTHHMHPEPLRKEKDLRWLRTNLKLLE HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHEE VDSLHQTKQIATRNFFVGAFAQNTSYGTTTSLINMLKVVWKIYTIHHSEHHPMEFAALFR HHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SVYRCLPLSDFKKEDIPAHIKPIIQSSFSNTLSSLLPGGNLLTPFFLNLFLAGSTNTYLT HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH CLAGIIATRHCQTISEEDRSVIIQQSMFEASFMLKEIVRQCNPILSVTISNAVKKAGIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH LDTVQSPSSGSTIAQDIVSHLAISLKQIIRENITTEKKGD HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKKIYALLLPLAVTGVFMVVVFTVNQLLFLASFLGNIHPSVKYLFLILGCLLPAYAIFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFRFFSSPSKPELPESETSKQIQNYLEYLSKNIPTHHMHPEPLRKEKDLRWLRTNLKLLE HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHEE VDSLHQTKQIATRNFFVGAFAQNTSYGTTTSLINMLKVVWKIYTIHHSEHHPMEFAALFR HHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SVYRCLPLSDFKKEDIPAHIKPIIQSSFSNTLSSLLPGGNLLTPFFLNLFLAGSTNTYLT HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH CLAGIIATRHCQTISEEDRSVIIQQSMFEASFMLKEIVRQCNPILSVTISNAVKKAGIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH LDTVQSPSSGSTIAQDIVSHLAISLKQIIRENITTEKKGD HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA