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The map label for this gene is ydgJ [C]

Identifier: 119356451

GI number: 119356451

Start: 686612

End: 687751

Strand: Direct

Name: ydgJ [C]

Synonym: Cpha266_0615

Alternate gene names: 119356451

Gene position: 686612-687751 (Clockwise)

Preceding gene: 119356450

Following gene: 119356452

Centisome position: 21.91

GC content: 47.89

Gene sequence:

>1140_bases
ATGAAAAAAAAAGTAAAAATAGGGTTTCTTGGGAGCGGATGGGCAAGGATTGCCCAGGCGCCGGCGTTTTCTCTTATGGA
TGATGTTAAACTTTCGGCTGTTGCCAGCCCTACAGAAAAGCATCGTCGAAAGTTTATGGAAATGTTCGGTATCAGCAAGG
GGTTTGATGACTGGCGTGATATGCTGGAAACGGATCTTGATCTGGTCTGTGTAACGACGCCGCCTTTTCTTCATGCGCCC
ATGGTTAGGGCACTGCTTGAAAGCGGTAAAAGTGTGTTGTGTGAAAAGCCGTTTGCGGTCAATGTTGCAGAAGCCCTTGC
GATGACAGAGGTTGCACAATCTTCCCCTGGTCTTGCGCTCGTCGATCATCAGCTTCGTTTTCACCCTGCGGTACGCTGCA
TGAAACAGATGATCGACAGTGGTGAAATCGGTAAGGTGTATGAGGTTCGCGCTGTAGTCAACCTGTCAAGTCGAAACAAG
CCGGATCATCGATACTCCTGGTGGAGTGATGCTGAAAAGGGGGGTGGGGCTCTGAAAGCTATCGGATCTCATCTTATTGA
TTTGAACCGATATCTGGTAGGCGAAATACATGAGGTGTCCTGTAATCTTGCAACGGCTCTTCCTTTCAGACCAGATGAAT
CCGGAAATCCCTGTCCTGTAACTTCAGATGACAGTTTTGCTATGATGATGAAGTTCGGCCCCTCATCCATCGCTCTTGGT
TCACCCTCATTGATGCATGTGACAACGGTTGGCGCCTATACCTGGTTTTCCTTTGAGGTCGTTGGAAGTATGAGGACGAT
AAGGCTTGATGGTGCAGGACGGCTCTGGGAGGTCGATAACGATCACTCAAAAGGAGGAAGAAGTCTTATTGATGCCCCGC
GATGGAAACAGCATGAGCCGATACTTCCCTGGGATGAACTGGTGCTGCAGGAAAAAATAAGACAGTCTTCCCTTGCTGTG
CATGGCGTTTTTGCTGTAGGCTTTGCCTTTCTTGCTCACAGAATAGTAAAAGCGATTCATAACGGCGAAAAAACTCTTCA
CGATGCGGCAGGATTTACTGATGGGTTGATGATCCAGAAAATATTGCAGGCAGGAAGCGATTCCGACAGACTGCGTCGTT
GGATAAAAATTCAATCATAA

Upstream 100 bases:

>100_bases
TGAAAAAGCCCGTCAGGCAAAAGCTCAACAGGTTGAGTAACGGTCTGAATAAGTATAATGCAAAGGGTGATTTTGATCAC
CCTTTTTTTGTGTCGTTTTT

Downstream 100 bases:

>100_bases
CGGGAATCAGCATGGCTTGGGTTTTTCTGGTAATAGCGGGAGTTTTTGAGTGCTTCTGGGCTGTCGGGCTTAAATATACC
GATGGTTTTGCCCGACCGGT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKKVKIGFLGSGWARIAQAPAFSLMDDVKLSAVASPTEKHRRKFMEMFGISKGFDDWRDMLETDLDLVCVTTPPFLHAP
MVRALLESGKSVLCEKPFAVNVAEALAMTEVAQSSPGLALVDHQLRFHPAVRCMKQMIDSGEIGKVYEVRAVVNLSSRNK
PDHRYSWWSDAEKGGGALKAIGSHLIDLNRYLVGEIHEVSCNLATALPFRPDESGNPCPVTSDDSFAMMMKFGPSSIALG
SPSLMHVTTVGAYTWFSFEVVGSMRTIRLDGAGRLWEVDNDHSKGGRSLIDAPRWKQHEPILPWDELVLQEKIRQSSLAV
HGVFAVGFAFLAHRIVKAIHNGEKTLHDAAGFTDGLMIQKILQAGSDSDRLRRWIKIQS

Sequences:

>Translated_379_residues
MKKKVKIGFLGSGWARIAQAPAFSLMDDVKLSAVASPTEKHRRKFMEMFGISKGFDDWRDMLETDLDLVCVTTPPFLHAP
MVRALLESGKSVLCEKPFAVNVAEALAMTEVAQSSPGLALVDHQLRFHPAVRCMKQMIDSGEIGKVYEVRAVVNLSSRNK
PDHRYSWWSDAEKGGGALKAIGSHLIDLNRYLVGEIHEVSCNLATALPFRPDESGNPCPVTSDDSFAMMMKFGPSSIALG
SPSLMHVTTVGAYTWFSFEVVGSMRTIRLDGAGRLWEVDNDHSKGGRSLIDAPRWKQHEPILPWDELVLQEKIRQSSLAV
HGVFAVGFAFLAHRIVKAIHNGEKTLHDAAGFTDGLMIQKILQAGSDSDRLRRWIKIQS
>Mature_379_residues
MKKKVKIGFLGSGWARIAQAPAFSLMDDVKLSAVASPTEKHRRKFMEMFGISKGFDDWRDMLETDLDLVCVTTPPFLHAP
MVRALLESGKSVLCEKPFAVNVAEALAMTEVAQSSPGLALVDHQLRFHPAVRCMKQMIDSGEIGKVYEVRAVVNLSSRNK
PDHRYSWWSDAEKGGGALKAIGSHLIDLNRYLVGEIHEVSCNLATALPFRPDESGNPCPVTSDDSFAMMMKFGPSSIALG
SPSLMHVTTVGAYTWFSFEVVGSMRTIRLDGAGRLWEVDNDHSKGGRSLIDAPRWKQHEPILPWDELVLQEKIRQSSLAV
HGVFAVGFAFLAHRIVKAIHNGEKTLHDAAGFTDGLMIQKILQAGSDSDRLRRWIKIQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI226371727, Length=390, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI9506675, Length=226, Percent_Identity=28.3185840707965, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI87081947, Length=210, Percent_Identity=25.2380952380952, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87082405, Length=235, Percent_Identity=26.3829787234043, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787574, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=5e-12,
Organism=Drosophila melanogaster, GI19920536, Length=328, Percent_Identity=28.0487804878049, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24581117, Length=169, Percent_Identity=27.810650887574, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41952; Mature: 41952

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVKIGFLGSGWARIAQAPAFSLMDDVKLSAVASPTEKHRRKFMEMFGISKGFDDWRD
CCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH
MLETDLDLVCVTTPPFLHAPMVRALLESGKSVLCEKPFAVNVAEALAMTEVAQSSPGLAL
HHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEE
VDHQLRFHPAVRCMKQMIDSGEIGKVYEVRAVVNLSSRNKPDHRYSWWSDAEKGGGALKA
ECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
IGSHLIDLNRYLVGEIHEVSCNLATALPFRPDESGNPCPVTSDDSFAMMMKFGPSSIALG
HHHHHHHHHHHHHCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECC
SPSLMHVTTVGAYTWFSFEVVGSMRTIRLDGAGRLWEVDNDHSKGGRSLIDAPRWKQHEP
CCCEEEEEEECHHHEEHEEEECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
ILPWDELVLQEKIRQSSLAVHGVFAVGFAFLAHRIVKAIHNGEKTLHDAAGFTDGLMIQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
ILQAGSDSDRLRRWIKIQS
HHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKKKVKIGFLGSGWARIAQAPAFSLMDDVKLSAVASPTEKHRRKFMEMFGISKGFDDWRD
CCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH
MLETDLDLVCVTTPPFLHAPMVRALLESGKSVLCEKPFAVNVAEALAMTEVAQSSPGLAL
HHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEE
VDHQLRFHPAVRCMKQMIDSGEIGKVYEVRAVVNLSSRNKPDHRYSWWSDAEKGGGALKA
ECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
IGSHLIDLNRYLVGEIHEVSCNLATALPFRPDESGNPCPVTSDDSFAMMMKFGPSSIALG
HHHHHHHHHHHHHCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECC
SPSLMHVTTVGAYTWFSFEVVGSMRTIRLDGAGRLWEVDNDHSKGGRSLIDAPRWKQHEP
CCCEEEEEEECHHHEEHEEEECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
ILPWDELVLQEKIRQSSLAVHGVFAVGFAFLAHRIVKAIHNGEKTLHDAAGFTDGLMIQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
ILQAGSDSDRLRRWIKIQS
HHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]