| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356340
Identifier: 119356340
GI number: 119356340
Start: 551255
End: 551947
Strand: Reverse
Name: 119356340
Synonym: Cpha266_0503
Alternate gene names: NA
Gene position: 551947-551255 (Counterclockwise)
Preceding gene: 119356341
Following gene: 119356339
Centisome position: 17.61
GC content: 49.06
Gene sequence:
>693_bases ATGCTGAAGAAACTTGTGTTATTTGATATAGACGGAACATTGCTCAAGGTGGGCAATATCAATCGTCAGGTACTCGCAGA TGCGCTTATGGCTGTCTACGGGACCGAAGGAAACGTCCGGCATCATGATTTTTCCGGTAAAATGGACAACCGGATCATCT ATGAAGTGCTGCAGCACGTCGGACTCTCTCTCTCTGCAATCAGCGAAAAATTCGATGCCGTCAAAGCGACCTATATCGAC ATGTTCCGAAAAAACACAACGCCCGACGACGTCAGACTCCTTGAGGGCGTCCCTGCACTTCTTCACGAACTCTCAAGCCG CACCGACCAGATCTCCGGACTGCTTACCGGCAATTTCGAAGCCTCGGGCAGACACAAGCTCATTCTGCCGAAAATCAACC ACTATTTTTCATTCGGGGCCTTTGCCGATGACGCTCATCATCGCGATGAACTTCCATCCATTGCTGTCGAGCGAGCTTAC CTGCTAACCGGAAAAAAGTTTTCGGCATCAGACATTGTCATCATCGGCGACACCCGATATGATATTCAATGCGCCAAAGT GCTCGACGCGCGCTCAATTGCTGTGGCTACAGGCAACTACTCCTTTGAAGAGCTGCAAAAACACTCTCCCGATGTGCTGT TTGAAAACCTCGCGGAAACAGCGCTTGTGATCGAAAAAATTTTCAACAACTAA
Upstream 100 bases:
>100_bases TGCCATGCACTGTACGGTGTTACGATGGAAGAGGAAGGGGTATCGAAACTTATCCCGGTAAGACTTCAAAAAACAGGGCT TTAAATGCCCGAAAGATGTT
Downstream 100 bases:
>100_bases CATAACCCATTGCTCTTTTATGAAGACCTACAGAAGACAGATAAGAGAAAAAATATTGCAGGCGCTCTATACACTCGAAC TCAGGGATACCGATATTGAA
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Phosphoglycolate Phosphatase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Domain Protein; HAD Family Hydrolase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLKKLVLFDIDGTLLKVGNINRQVLADALMAVYGTEGNVRHHDFSGKMDNRIIYEVLQHVGLSLSAISEKFDAVKATYID MFRKNTTPDDVRLLEGVPALLHELSSRTDQISGLLTGNFEASGRHKLILPKINHYFSFGAFADDAHHRDELPSIAVERAY LLTGKKFSASDIVIIGDTRYDIQCAKVLDARSIAVATGNYSFEELQKHSPDVLFENLAETALVIEKIFNN
Sequences:
>Translated_230_residues MLKKLVLFDIDGTLLKVGNINRQVLADALMAVYGTEGNVRHHDFSGKMDNRIIYEVLQHVGLSLSAISEKFDAVKATYID MFRKNTTPDDVRLLEGVPALLHELSSRTDQISGLLTGNFEASGRHKLILPKINHYFSFGAFADDAHHRDELPSIAVERAY LLTGKKFSASDIVIIGDTRYDIQCAKVLDARSIAVATGNYSFEELQKHSPDVLFENLAETALVIEKIFNN >Mature_230_residues MLKKLVLFDIDGTLLKVGNINRQVLADALMAVYGTEGNVRHHDFSGKMDNRIIYEVLQHVGLSLSAISEKFDAVKATYID MFRKNTTPDDVRLLEGVPALLHELSSRTDQISGLLTGNFEASGRHKLILPKINHYFSFGAFADDAHHRDELPSIAVERAY LLTGKKFSASDIVIIGDTRYDIQCAKVLDARSIAVATGNYSFEELQKHSPDVLFENLAETALVIEKIFNN
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25637; Mature: 25637
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKLVLFDIDGTLLKVGNINRQVLADALMAVYGTEGNVRHHDFSGKMDNRIIYEVLQHV CCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHH GLSLSAISEKFDAVKATYIDMFRKNTTPDDVRLLEGVPALLHELSSRTDQISGLLTGNFE CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC ASGRHKLILPKINHYFSFGAFADDAHHRDELPSIAVERAYLLTGKKFSASDIVIIGDTRY CCCCEEEEECCCCHHEECCCCCCCCHHHHCCCHHHHHHHHEEECCCCCCCCEEEECCCCC DIQCAKVLDARSIAVATGNYSFEELQKHSPDVLFENLAETALVIEKIFNN CCHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKKLVLFDIDGTLLKVGNINRQVLADALMAVYGTEGNVRHHDFSGKMDNRIIYEVLQHV CCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHH GLSLSAISEKFDAVKATYIDMFRKNTTPDDVRLLEGVPALLHELSSRTDQISGLLTGNFE CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC ASGRHKLILPKINHYFSFGAFADDAHHRDELPSIAVERAYLLTGKKFSASDIVIIGDTRY CCCCEEEEECCCCHHEECCCCCCCCHHHHCCCHHHHHHHHEEECCCCCCCCEEEECCCCC DIQCAKVLDARSIAVATGNYSFEELQKHSPDVLFENLAETALVIEKIFNN CCHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA