| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356323
Identifier: 119356323
GI number: 119356323
Start: 533801
End: 534814
Strand: Reverse
Name: 119356323
Synonym: Cpha266_0486
Alternate gene names: NA
Gene position: 534814-533801 (Counterclockwise)
Preceding gene: 119356324
Following gene: 119356322
Centisome position: 17.07
GC content: 51.97
Gene sequence:
>1014_bases ATGCACATGTCAGACGCTCTGCTCTCCCCGATCGTCGGAGGAGCATTCTGGATAATCAGCGGTACGCTTATCGGCTATTC GGCAAAAAAAATTATCGAAGAAAACGATCATGCAAAAACGCCCCTGATGGGTGTGATGGGAGCCTTTATTTTTGCCGCAC AGATGATCAATTTTTCAATTCCCGGAACCGGCTCAAGCGGACATCTTGGCGGCGGTCTTTTGCTTGCAGCGCTACTCGGG CCATACCGAGCATTTATCACGTTATCCTCCGTTCTTATTATCCAGTCTCTTTTTTTTGGCGACGGAGGACTGCTTGCGCT TGGATGCAACATGTTCAATCTGGCGTACTTTCCGGCCTTTCTCGCTTATCCGCTCATCTTCCGAAAAATCATCGGCAATA ATCCCTCGCAGCAACGACTTGCCGCAGGAAGTATCTCTGCGGCCATCGCTGGATTGCTTATGGGGGCATTTTCCGTTGTC ATCGAAACCGTGCTCTCGGGTATTTCAGAACTTCCGTTTGGCTCCTTTATGCTCTTTATGATGCCGATCCACCTCGCCAT CGGTATTGTTGAAGGTCTGGTAACATGGGCGGTGCTTTCCTTTGTAGCAAAAACAGATCCCGCTCTGCTCCCTTCAAATC AAAACGCTGCCAGACCCAGGGCTGCCATCCTTGGCGTGTTAACCATTGCCGCACTGCTGACCGGAGGAGTCCTCTCCTGG TTTGCATCATCCTCTCCGGATGGGCTGGAATGGTCGATATCCCGGACAAGCGGCTCAGAAGAGTTGCTGAACAGAGGCGA ACCAATTCATGAACTGCTTGGATCCATACAGGAGAAAACCGCTTTTCTGCCCGACTACTCGTTCAAAACCGCCGATGCGA CCTCTCCCTCTGGCGATTCGCCGGTAAACCCGGCAGCCACCGTTTCAGGCCTTGCAGGGAGCTTCTCCGTTCTCATTATG GCAGGGCTGGCTGGCCTGATTCTTGCAAAAAAGCGAACAAGGGGGAACCATTGA
Upstream 100 bases:
>100_bases AACATGAGTGTCAGGCTTTTTGCTTTTTGATATCACAATCGTTACTATTTTGACACAGGAACGCGCTCAATAAGCCCGAA TTAAAAAGGAGACCCATCTC
Downstream 100 bases:
>100_bases TGACAAACCGGGTCACGCGATTTTTTCCATGCAATGCCAATGAAAAACAGAACCCGGAAAAAGGCGCCCTGCTCCTGGGA AGCGACCGATCGGCGCTTCT
Product: cobalamin (vitamin B12) biosynthesis CbiM protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSIPGTGSSGHLGGGLLLAALLG PYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAFLAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVV IETVLSGISELPFGSFMLFMMPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDSPVNPAATVSGLAGSFSVLIM AGLAGLILAKKRTRGNH
Sequences:
>Translated_337_residues MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSIPGTGSSGHLGGGLLLAALLG PYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAFLAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVV IETVLSGISELPFGSFMLFMMPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDSPVNPAATVSGLAGSFSVLIM AGLAGLILAKKRTRGNH >Mature_337_residues MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSIPGTGSSGHLGGGLLLAALLG PYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAFLAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVV IETVLSGISELPFGSFMLFMMPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDSPVNPAATVSGLAGSFSVLIM AGLAGLILAKKRTRGNH
Specific function: Unknown
COG id: COG0310
COG function: function code P; ABC-type Co2+ transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002751 [H]
Pfam domain/function: PF01891 CbiM [H]
EC number: NA
Molecular weight: Translated: 35113; Mature: 35113
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC PGTGSSGHLGGGLLLAALLGPYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH LAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVVIETVLSGISELPFGSFMLFM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDS HHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PVNPAATVSGLAGSFSVLIMAGLAGLILAKKRTRGNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC PGTGSSGHLGGGLLLAALLGPYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH LAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVVIETVLSGISELPFGSFMLFM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDS HHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PVNPAATVSGLAGSFSVLIMAGLAGLILAKKRTRGNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]