| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356319
Identifier: 119356319
GI number: 119356319
Start: 530847
End: 531710
Strand: Direct
Name: 119356319
Synonym: Cpha266_0482
Alternate gene names: NA
Gene position: 530847-531710 (Clockwise)
Preceding gene: 119356318
Following gene: 119356320
Centisome position: 16.94
GC content: 48.73
Gene sequence:
>864_bases ATGGATATAAAGAGGGCAGCCGTTTATATCGATGGCGCGAATTTGTTTTTTACTCAGCGAAGTCTTGGCTGGCAGATTGA TTTTTCACGGTTGATCACTTTTTTTCTTGACAGATATGCTTCGGTTGAGGCGAGGTATTATGTGCCTGTTTCCGAGCCGG CTTCCGAGGAGCAGGCGGCCTTTACAAGAGTTCTTGCCGCACACGGCTATATCCTGACATCAAAACCGGTCAAGAAGATT GTCAACAAGACTACGGGCGAAATAATCATCAAGGGTAATCTCGATGTTGAGCTTGCTGTCGATGCGCTGGTTGGAGAGAT TGCCTATGATACGTTTATTCTTTTCAGCGGAGACAGCGATTTTTTACCTCTCCTGCGGGCCTTGAAAGAGAAAGGTAAAG AGGTTTTGGTTTATTCCACAGAGGGAATCAGCGCATGGGAGCTTCTTATTGAGCCCGGCATTGATTTTCACGACCTCGCC GGCCTGAGGGATCGCATAGGCCACGCTAAACCCGGAGAGGGGGGGCGCAGGGAAACAGGCGGGCAGGCGCTTCAGCAGGA AAACGCGTTTTTGCGGTTGCCGGTTGTTGGCGAGGTGTTTACCGGAACGGTTCTTTCGGTGAAATCCTATGGAGTTTTTC TTGCCAACACCTATCATGCCAAATGCCTTCTTCCTCTCAGTTTTCTCGGGATTTCCAGGCATATCACTGATTTAACGGAG GTTGTGCGTATGGCGGATGTGTTTGATGTTGTTGTCTTCAAGGTGGATACATCTCATGAAGTGCCAGAGATAACGGTCAA GCTTGCTGACAAGGAGAAGTCTCATGAACTCTCTGAAAGAGTTGCCGGTTCGCCATTATCTTGA
Upstream 100 bases:
>100_bases GAACGAAAAGAGGGCTTCCTGACGTTTAATTACAGGGAATATGATTTTATCTGAACCAGAAGATGGAGATTGGCGTGGTG TATGAACAGAGGGAGAAAAG
Downstream 100 bases:
>100_bases GCGAACGTGTATCGGGAAGGCTGGCGTATGATGATGGTTGTGCATGTTTACCTGAGGTTTTTTATGCTTGTAATACATAA AGGAGCAGTATGGATATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTRVLAAHGYILTSKPVKKI VNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSDFLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLA GLRDRIGHAKPGEGGRRETGGQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS
Sequences:
>Translated_287_residues MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTRVLAAHGYILTSKPVKKI VNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSDFLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLA GLRDRIGHAKPGEGGRRETGGQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS >Mature_287_residues MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTRVLAAHGYILTSKPVKKI VNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSDFLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLA GLRDRIGHAKPGEGGRRETGGQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31708; Mature: 31708
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA CCCCEEEEEEECCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD HHHHHHHCCEEEECHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHEEEEEEECCCC FLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLAGLRDRIGHAKPGEGGRRETG HHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC GQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE CHHHHHCCCEEEECEECHHHCCEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS HHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA CCCCEEEEEEECCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD HHHHHHHCCEEEECHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHEEEEEEECCCC FLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLAGLRDRIGHAKPGEGGRRETG HHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC GQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE CHHHHHCCCEEEECEECHHHCCEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS HHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA