| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356294
Identifier: 119356294
GI number: 119356294
Start: 502390
End: 502815
Strand: Reverse
Name: 119356294
Synonym: Cpha266_0456
Alternate gene names: NA
Gene position: 502815-502390 (Counterclockwise)
Preceding gene: 119356307
Following gene: 119356293
Centisome position: 16.04
GC content: 52.82
Gene sequence:
>426_bases ATGAAAAAACTTTCGATCCTTTTTCTCGCGCTCATCATCGTAGCCGCAGCCACAGTTTCGGCTTCGGCAAAGTGCAAGTA CCCCGGCATTGAGATCAGTGAAAAACAGGGCGTCGGGCACTACCTTACCGATGACAACGGCATGGCTCTCTACTGGTTTA CCAAAGACTCTCCTGGAACAAGCACCTGCGCGGGGCCCTGTCTTGAAAAGTGGCCGGCGTTTTACCACGAAAAGTTTGTG AAACCCAAAGCTCTCTCCATGGAGGAGTTCGGCACGATCATGCGAGCAGACGGCAAACCTCAGCTCACCTTCAGAGGTTA TCCGCTCTACCTCTTTGCCGGTGACAAAGCGGCTGGAAATACCAACGGTCAGGGCGTCAACAATGTCTGGTTTGTGGTTA ACCCCGGCAACTTCCCCCCGAAATAA
Upstream 100 bases:
>100_bases GTTCAGCAGATTTGCAACTTTTAGGCTGTCATGAGGGATTCTTGAAGAAAGAAACAGACAATATTACCTATCACCCCAAA CTACAGGACAGGAGTAACCG
Downstream 100 bases:
>100_bases CAACGGCACAGGGGGAGATCGGGTTACAGGTTCTGAGTTCTGAGTGCAGGGAGTGGGCTGCGGGCAGCGCAGGATAATCG GTAAAGCGCTTGCGGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Blue Copper Domain Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKKLSILFLALIIVAAATVSASAKCKYPGIEISEKQGVGHYLTDDNGMALYWFTKDSPGTSTCAGPCLEKWPAFYHEKFV KPKALSMEEFGTIMRADGKPQLTFRGYPLYLFAGDKAAGNTNGQGVNNVWFVVNPGNFPPK
Sequences:
>Translated_141_residues MKKLSILFLALIIVAAATVSASAKCKYPGIEISEKQGVGHYLTDDNGMALYWFTKDSPGTSTCAGPCLEKWPAFYHEKFV KPKALSMEEFGTIMRADGKPQLTFRGYPLYLFAGDKAAGNTNGQGVNNVWFVVNPGNFPPK >Mature_141_residues MKKLSILFLALIIVAAATVSASAKCKYPGIEISEKQGVGHYLTDDNGMALYWFTKDSPGTSTCAGPCLEKWPAFYHEKFV KPKALSMEEFGTIMRADGKPQLTFRGYPLYLFAGDKAAGNTNGQGVNNVWFVVNPGNFPPK
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15401; Mature: 15401
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSILFLALIIVAAATVSASAKCKYPGIEISEKQGVGHYLTDDNGMALYWFTKDSPGT CCHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCEEECCCCEEEEEEECCCCCC STCAGPCLEKWPAFYHEKFVKPKALSMEEFGTIMRADGKPQLTFRGYPLYLFAGDKAAGN CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCEEECCCCCEEEECCCEEEEEECCCCCCC TNGQGVNNVWFVVNPGNFPPK CCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKKLSILFLALIIVAAATVSASAKCKYPGIEISEKQGVGHYLTDDNGMALYWFTKDSPGT CCHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCEEECCCCEEEEEEECCCCCC STCAGPCLEKWPAFYHEKFVKPKALSMEEFGTIMRADGKPQLTFRGYPLYLFAGDKAAGN CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCEEECCCCCEEEECCCEEEEEECCCCCCC TNGQGVNNVWFVVNPGNFPPK CCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA