| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is apt
Identifier: 119356261
GI number: 119356261
Start: 467760
End: 468293
Strand: Direct
Name: apt
Synonym: Cpha266_0423
Alternate gene names: 119356261
Gene position: 467760-468293 (Clockwise)
Preceding gene: 119356260
Following gene: 119356265
Centisome position: 14.93
GC content: 43.82
Gene sequence:
>534_bases ATGACTATTAAATCGCGTATCCGTTCAATTCCCGATTACCCGAAAAAAGGGATCATGTTTCGTGATATTACAACGCTTAT CAAAGATCCGGTTGGTTTTCGTCTGGTAATCGATAATCTTACCCAGCACTATCTTCAGAACGGAGTTGATTTTGATGTGA TTGTCGGCATAGAAGCAAGAGGATTTATTATCGGCGGTGCATTATCCTATGCGCTTGGAAAAGGTTTTGTTCCGGTAAGA AAACCGGGAAAATTGCCTGCTGATGTTGCTTCCCAGAAATATGAACTTGAATATGGAAGCGATACCATAGAAATACATAT TGATGCTCTCGAAGAGGGAAGCAGGGTGCTTTTGGTTGATGACCTTCTGGCAACAGGCGGAACGGCGCTTGCGGCTGCAG CATTGGTTGAAAAAGTTGGCGGGGTTGTTGCTGAAATGGCCTTTATTGTCAATCTGCCTGATGTTGGCGGTGAACAGCGT ATCCTTGACAAAGGGTACAGTATCTTTTCCCTTACAGATTTTGAAGGCGATTAG
Upstream 100 bases:
>100_bases TTGAGGGGATTGACGATGATTTGAATTTAATGGGCAGACTGTTATTTTAAACCCATCTTGTCGCCTGCATCATCTTACCA ACACTCAAATCATTCAGTTC
Downstream 100 bases:
>100_bases CCGTATTCTTCCCTGTTCCGTAAGGGGGGCTTATGAATAAAACTGCTCCCCTTACCGTTTTGAGTGTCGTTCTGCAGTTG TTTTCGCCATTCGTGTGCTG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTIKSRIRSIPDYPKKGIMFRDITTLIKDPVGFRLVIDNLTQHYLQNGVDFDVIVGIEARGFIIGGALSYALGKGFVPVR KPGKLPADVASQKYELEYGSDTIEIHIDALEEGSRVLLVDDLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDVGGEQR ILDKGYSIFSLTDFEGD
Sequences:
>Translated_177_residues MTIKSRIRSIPDYPKKGIMFRDITTLIKDPVGFRLVIDNLTQHYLQNGVDFDVIVGIEARGFIIGGALSYALGKGFVPVR KPGKLPADVASQKYELEYGSDTIEIHIDALEEGSRVLLVDDLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDVGGEQR ILDKGYSIFSLTDFEGD >Mature_176_residues TIKSRIRSIPDYPKKGIMFRDITTLIKDPVGFRLVIDNLTQHYLQNGVDFDVIVGIEARGFIIGGALSYALGKGFVPVRK PGKLPADVASQKYELEYGSDTIEIHIDALEEGSRVLLVDDLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDVGGEQRI LDKGYSIFSLTDFEGD
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=174, Percent_Identity=43.1034482758621, Blast_Score=138, Evalue=3e-33, Organism=Homo sapiens, GI71773201, Length=125, Percent_Identity=48.8, Blast_Score=120, Evalue=7e-28, Organism=Escherichia coli, GI1786675, Length=174, Percent_Identity=52.8735632183908, Blast_Score=187, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509087, Length=161, Percent_Identity=41.6149068322981, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6323619, Length=161, Percent_Identity=41.6149068322981, Blast_Score=114, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6320649, Length=170, Percent_Identity=37.0588235294118, Blast_Score=101, Evalue=7e-23, Organism=Drosophila melanogaster, GI17136334, Length=166, Percent_Identity=42.1686746987952, Blast_Score=133, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_CHLPD (A1BDK4)
Other databases:
- EMBL: CP000492 - RefSeq: YP_910905.1 - ProteinModelPortal: A1BDK4 - SMR: A1BDK4 - STRING: A1BDK4 - GeneID: 4570977 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0423 - NMPDR: fig|290317.7.peg.434 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19114; Mature: 18983
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKSRIRSIPDYPKKGIMFRDITTLIKDPVGFRLVIDNLTQHYLQNGVDFDVIVGIEAR CCHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCC GFIIGGALSYALGKGFVPVRKPGKLPADVASQKYELEYGSDTIEIHIDALEEGSRVLLVD CEEEEHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEEEECCCCCEEEEEE DLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDVGGEQRILDKGYSIFSLTDFEGD HHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCEEEEEECCCCC >Mature Secondary Structure TIKSRIRSIPDYPKKGIMFRDITTLIKDPVGFRLVIDNLTQHYLQNGVDFDVIVGIEAR CHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCC GFIIGGALSYALGKGFVPVRKPGKLPADVASQKYELEYGSDTIEIHIDALEEGSRVLLVD CEEEEHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEEEECCCCCEEEEEE DLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDVGGEQRILDKGYSIFSLTDFEGD HHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA