| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356259
Identifier: 119356259
GI number: 119356259
Start: 465769
End: 466218
Strand: Reverse
Name: 119356259
Synonym: Cpha266_0421
Alternate gene names: NA
Gene position: 466218-465769 (Counterclockwise)
Preceding gene: 119356262
Following gene: 119356257
Centisome position: 14.88
GC content: 40.89
Gene sequence:
>450_bases ATGGCAAAAACAGAGATGGGATCGCCTGACAAATATGATCTTTTTGCTGAAAAGATTGACCAATTCAAGTTGCTTGTTGA AGAAAAAAAGAATTTGCAGGAACAAATCATGCTTCTGCAGGAAGAATTTAATGAAAAGATCAAGCCATTTGAAAATCAGC TCTCTACCGTTGTAAGAAAACTTGAGCTTGAACTTGCAAGAGTGGAAGGAAAAACATCTGAAAAACCTGCCCCTCTTAAA TATAGTCGCGGTCGGCTTGGCATATCGATCAAAGAACTGCTCGGCAACTCACCAGACAGAGCGTTTAAACCAAAAGAGAT TGCCGATGCGCTTTCCACCAAAGGCACAACCGTAAGCCTCTGGCTCAACAAGTACGGCTCAAGCGATCAGGAAATCGAAC GTATTCCATCAGAAAACGGAGGCAAACGCTTTTTATATAAAATAAAGTAA
Upstream 100 bases:
>100_bases TACATGATTACAATATCAACTTGCACGCACGACGATAATAGTATATATTTGTGCTGATTGTGACATGCATTTCTAACAAC ACAAAAAACACTGACTAACT
Downstream 100 bases:
>100_bases GTTACCTCCTTTCATTGCAAATAAAAAAGCGCATGAAAATGCGCTTTTTTATTGCAGGGAAAAAATGATCCTTATAAAAG GCATACAGGGACAACTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAKTEMGSPDKYDLFAEKIDQFKLLVEEKKNLQEQIMLLQEEFNEKIKPFENQLSTVVRKLELELARVEGKTSEKPAPLK YSRGRLGISIKELLGNSPDRAFKPKEIADALSTKGTTVSLWLNKYGSSDQEIERIPSENGGKRFLYKIK
Sequences:
>Translated_149_residues MAKTEMGSPDKYDLFAEKIDQFKLLVEEKKNLQEQIMLLQEEFNEKIKPFENQLSTVVRKLELELARVEGKTSEKPAPLK YSRGRLGISIKELLGNSPDRAFKPKEIADALSTKGTTVSLWLNKYGSSDQEIERIPSENGGKRFLYKIK >Mature_148_residues AKTEMGSPDKYDLFAEKIDQFKLLVEEKKNLQEQIMLLQEEFNEKIKPFENQLSTVVRKLELELARVEGKTSEKPAPLKY SRGRLGISIKELLGNSPDRAFKPKEIADALSTKGTTVSLWLNKYGSSDQEIERIPSENGGKRFLYKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17065; Mature: 16934
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTEMGSPDKYDLFAEKIDQFKLLVEEKKNLQEQIMLLQEEFNEKIKPFENQLSTVVRK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LELELARVEGKTSEKPAPLKYSRGRLGISIKELLGNSPDRAFKPKEIADALSTKGTTVSL HHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEE WLNKYGSSDQEIERIPSENGGKRFLYKIK EEHHCCCCHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure AKTEMGSPDKYDLFAEKIDQFKLLVEEKKNLQEQIMLLQEEFNEKIKPFENQLSTVVRK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LELELARVEGKTSEKPAPLKYSRGRLGISIKELLGNSPDRAFKPKEIADALSTKGTTVSL HHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEE WLNKYGSSDQEIERIPSENGGKRFLYKIK EEHHCCCCHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA