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The map label for this gene is rimP

Identifier: 119356206

GI number: 119356206

Start: 409789

End: 410310

Strand: Direct

Name: rimP

Synonym: Cpha266_0367

Alternate gene names: 119356206

Gene position: 409789-410310 (Clockwise)

Preceding gene: 119356205

Following gene: 119356207

Centisome position: 13.08

GC content: 46.93

Gene sequence:

>522_bases
ATGGAAGAAAAAATAAGGCGTTGCGTTCTTCAAGTGCTTGAGGCGACAGCCGGAACGAAGGGTGAAGGAGTCTATCTTGT
CAGCCTTTCAATCAAAGGTTCAGGAAAAGGAACATCCATAGAGGTGCTTGTCGATACCGATACTGGCATTCGTATTGATC
AATGTGCTTTTTTGAGTCGCCGGATAAGGGAGTGTCTTGAAGTCGAAGAGGAATCGGACGGCATGTCCGGTGATGATTTT
AATCTTGATGTGGCTTCACCGGGACTTGGAAAAGCGATTATTCTTCAGAGGCAGTACGCACGGCATGTCGGCAGGCTTTT
TCGGGTTACATTTCGCGAAGAAGATGGCAGTATGACTGAGATTTCGGGACATCTCAGGGAGATTCTTTTTCCTGAAGAGG
AGAATGCTTCGCTGGTTATTGAACCGCTTGGAAAGAAAAAGGCAGGAAAAAAAGTATCCTCGGAAAACAGAACGTTGCGG
CTTGACCGTGTCATCAGGGCAGTTCCGGAAGCTGAGTTGTAA

Upstream 100 bases:

>100_bases
ATTCCGACTGTGAAAGTGATCGAAGGATGTTGGTTATCCGATGTGAAAGTGGGGAACTCCCCACTTTTTTGTTTTACAGA
AAAAAGCGGAGTGGCGACCA

Downstream 100 bases:

>100_bases
CCGGAGGGAGATGGGTCGGTAATATTTCTTTTTTTAATGCACAATAAGCAAACAGATGGTCAGAAAGCAGGTAAAAACGG
AGGGGCAGGACAGGAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MEEKIRRCVLQVLEATAGTKGEGVYLVSLSIKGSGKGTSIEVLVDTDTGIRIDQCAFLSRRIRECLEVEEESDGMSGDDF
NLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMTEISGHLREILFPEEENASLVIEPLGKKKAGKKVSSENRTLR
LDRVIRAVPEAEL

Sequences:

>Translated_173_residues
MEEKIRRCVLQVLEATAGTKGEGVYLVSLSIKGSGKGTSIEVLVDTDTGIRIDQCAFLSRRIRECLEVEEESDGMSGDDF
NLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMTEISGHLREILFPEEENASLVIEPLGKKKAGKKVSSENRTLR
LDRVIRAVPEAEL
>Mature_173_residues
MEEKIRRCVLQVLEATAGTKGEGVYLVSLSIKGSGKGTSIEVLVDTDTGIRIDQCAFLSRRIRECLEVEEESDGMSGDDF
NLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMTEISGHLREILFPEEENASLVIEPLGKKKAGKKVSSENRTLR
LDRVIRAVPEAEL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_CHLPD (A1BDE9)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_910850.1
- ProteinModelPortal:   A1BDE9
- STRING:   A1BDE9
- GeneID:   4569345
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_0367
- NMPDR:   fig|290317.7.peg.374
- eggNOG:   NOG147565
- HOGENOM:   HBG405620
- OMA:   PGIGEPI
- ProtClustDB:   PRK14641
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19176; Mature: 19176

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKIRRCVLQVLEATAGTKGEGVYLVSLSIKGSGKGTSIEVLVDTDTGIRIDQCAFLSR
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHH
RIRECLEVEEESDGMSGDDFNLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMTE
HHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHH
ISGHLREILFPEEENASLVIEPLGKKKAGKKVSSENRTLRLDRVIRAVPEAEL
HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCCC
>Mature Secondary Structure
MEEKIRRCVLQVLEATAGTKGEGVYLVSLSIKGSGKGTSIEVLVDTDTGIRIDQCAFLSR
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHH
RIRECLEVEEESDGMSGDDFNLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMTE
HHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHH
ISGHLREILFPEEENASLVIEPLGKKKAGKKVSSENRTLRLDRVIRAVPEAEL
HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA