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The map label for this gene is ftsY [H]

Identifier: 119356176

GI number: 119356176

Start: 368262

End: 369212

Strand: Direct

Name: ftsY [H]

Synonym: Cpha266_0337

Alternate gene names: 119356176

Gene position: 368262-369212 (Clockwise)

Preceding gene: 119356173

Following gene: 119356178

Centisome position: 11.75

GC content: 48.16

Gene sequence:

>951_bases
ATGGGTTTTTTTGACAAGTTCAAACTATCACGGCTTAAAGAAGGGCTCAGCAAAACAAGCGAAACGTTTAGGGAAAAGCT
CTCTCTGATAACTCAGGGTAAAACCGAAATCGACGAAGAGTTTCTTGAAGAACTCGAACATATTCTTGTTGGTGCCGATG
TCGGTGTTGAAACAACCCTCAGTATTGTTGATGCCATTACCGAACGGGCAAAGCGCGAATCATACCGTTCCGCTGAAGAG
CTGAACCGGATGCTGATGGAAGAAATTCAGCAGATGCTTCTTGATTCCGGAGAGCATTATCCGATTGACTTTGATGCGCC
GCTTTCGGCAAAGCCCTATGTTATTCTTGTTGTCGGGGTAAACGGCGCAGGAAAAACAACAAGCGTGGCTAAACTGGCTT
ATAACTACGAAAAAGCAGGTAAAAAAGTGATCATCGCCGCAGCTGATACCTTTCGAGCGGCAGCATACGAACAACTCAAG
ATTTGGGCAGATCGCGCAGGGGTTCCGCTGATCGGTCAGGGACAGGGTGCGGATCCGGCTTCGGTTGTGTATGATGCCGT
CAGCTCCGCCGTTTCAAGAAATTCCGATGTGGTGCTTGTTGATACGGCCGGCCGTCTGCATAACAAGAGTCATCTGATGG
AAGAGCTTGCGAAAATTATGCGTGTTGCAAAAAAGAAGATTCCGGAAGCTCCGCATGAAGTTCTTCTTGTGCTTGATGGA
ACGACAGGCCAGAACGCGGTTTCCCAGGCAAGGGAGTTTACGCGCTTTGTGAATGTTACCGGTCTTGTGCTTACCAAACT
GGACGGAACTTCCAAAGGCGGTATTGTGCTCTCCATTTCAAGAGAGCTTAATCTGCCGGTAAAGTATATCGGCGTAGGTG
AAAAGATTGACGATTTGCAGTTGTTTGATCGTGCCCGTTTTGTTGAAGCGTTGCTTGGGCGTCAGGAGTAG

Upstream 100 bases:

>100_bases
TTTCGTTAAATTAAAGTTCAGGTCGAATGCGGTTTTATTGCCTGTTTTCGGTATTGAGCTGAGAGTTTTAGTGTTTAACA
TAGACAATATCTCTTTTAAT

Downstream 100 bases:

>100_bases
TTTCAGGCTATGAGTTCCGGGATTTTGTTTTTAATGATGAGGAGCAGTTGTTCTGAATCGGCGATTTTCAGAAGATGAGT
GCTGTTTTTCGTGTCCTGTG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MGFFDKFKLSRLKEGLSKTSETFREKLSLITQGKTEIDEEFLEELEHILVGADVGVETTLSIVDAITERAKRESYRSAEE
LNRMLMEEIQQMLLDSGEHYPIDFDAPLSAKPYVILVVGVNGAGKTTSVAKLAYNYEKAGKKVIIAAADTFRAAAYEQLK
IWADRAGVPLIGQGQGADPASVVYDAVSSAVSRNSDVVLVDTAGRLHNKSHLMEELAKIMRVAKKKIPEAPHEVLLVLDG
TTGQNAVSQAREFTRFVNVTGLVLTKLDGTSKGGIVLSISRELNLPVKYIGVGEKIDDLQLFDRARFVEALLGRQE

Sequences:

>Translated_316_residues
MGFFDKFKLSRLKEGLSKTSETFREKLSLITQGKTEIDEEFLEELEHILVGADVGVETTLSIVDAITERAKRESYRSAEE
LNRMLMEEIQQMLLDSGEHYPIDFDAPLSAKPYVILVVGVNGAGKTTSVAKLAYNYEKAGKKVIIAAADTFRAAAYEQLK
IWADRAGVPLIGQGQGADPASVVYDAVSSAVSRNSDVVLVDTAGRLHNKSHLMEELAKIMRVAKKKIPEAPHEVLLVLDG
TTGQNAVSQAREFTRFVNVTGLVLTKLDGTSKGGIVLSISRELNLPVKYIGVGEKIDDLQLFDRARFVEALLGRQE
>Mature_315_residues
GFFDKFKLSRLKEGLSKTSETFREKLSLITQGKTEIDEEFLEELEHILVGADVGVETTLSIVDAITERAKRESYRSAEEL
NRMLMEEIQQMLLDSGEHYPIDFDAPLSAKPYVILVVGVNGAGKTTSVAKLAYNYEKAGKKVIIAAADTFRAAAYEQLKI
WADRAGVPLIGQGQGADPASVVYDAVSSAVSRNSDVVLVDTAGRLHNKSHLMEELAKIMRVAKKKIPEAPHEVLLVLDGT
TGQNAVSQAREFTRFVNVTGLVLTKLDGTSKGGIVLSISRELNLPVKYIGVGEKIDDLQLFDRARFVEALLGRQE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=286, Percent_Identity=32.5174825174825, Blast_Score=151, Evalue=8e-37,
Organism=Homo sapiens, GI226371618, Length=207, Percent_Identity=37.1980676328502, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI295424842, Length=307, Percent_Identity=30.2931596091205, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI23308697, Length=307, Percent_Identity=30.2931596091205, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=33.0882352941176, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1789874, Length=318, Percent_Identity=50.9433962264151, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1788963, Length=280, Percent_Identity=34.2857142857143, Blast_Score=148, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=286, Percent_Identity=31.1188811188811, Blast_Score=151, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=31.3333333333333, Blast_Score=121, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6325345, Length=207, Percent_Identity=39.1304347826087, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6320498, Length=320, Percent_Identity=27.5, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17647949, Length=207, Percent_Identity=37.6811594202899, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24641198, Length=228, Percent_Identity=32.4561403508772, Blast_Score=107, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34697; Mature: 34566

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFDKFKLSRLKEGLSKTSETFREKLSLITQGKTEIDEEFLEELEHILVGADVGVETTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
SIVDAITERAKRESYRSAEELNRMLMEEIQQMLLDSGEHYPIDFDAPLSAKPYVILVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC
NGAGKTTSVAKLAYNYEKAGKKVIIAAADTFRAAAYEQLKIWADRAGVPLIGQGQGADPA
CCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH
SVVYDAVSSAVSRNSDVVLVDTAGRLHNKSHLMEELAKIMRVAKKKIPEAPHEVLLVLDG
HHHHHHHHHHHCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
TTGQNAVSQAREFTRFVNVTGLVLTKLDGTSKGGIVLSISRELNLPVKYIGVGEKIDDLQ
CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHH
LFDRARFVEALLGRQE
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GFFDKFKLSRLKEGLSKTSETFREKLSLITQGKTEIDEEFLEELEHILVGADVGVETTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
SIVDAITERAKRESYRSAEELNRMLMEEIQQMLLDSGEHYPIDFDAPLSAKPYVILVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC
NGAGKTTSVAKLAYNYEKAGKKVIIAAADTFRAAAYEQLKIWADRAGVPLIGQGQGADPA
CCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH
SVVYDAVSSAVSRNSDVVLVDTAGRLHNKSHLMEELAKIMRVAKKKIPEAPHEVLLVLDG
HHHHHHHHHHHCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
TTGQNAVSQAREFTRFVNVTGLVLTKLDGTSKGGIVLSISRELNLPVKYIGVGEKIDDLQ
CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHH
LFDRARFVEALLGRQE
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]