| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356150
Identifier: 119356150
GI number: 119356150
Start: 342385
End: 343239
Strand: Reverse
Name: 119356150
Synonym: Cpha266_0308
Alternate gene names: NA
Gene position: 343239-342385 (Counterclockwise)
Preceding gene: 119356151
Following gene: 119356144
Centisome position: 10.95
GC content: 51.46
Gene sequence:
>855_bases ATGCAACAGAGATCAACAACGATCACCATTCTTGCAGATAACTGTGCCGCTCCAGGCCTCAAAACCGAGCACGGCCTCTC TTTTTTTATTGAAAAAGAGGATATAACCATTCTTTTCGATACCGCCTGTGATAACACGCTGCTATACAATGCAGGGGCTC TCGGGGTTGATCTCTCACAGACGGAACTGCTCGTACTGAGCCATGGACACTACGACCATACGGGAGGAGTTGCCGAGGTT CTCTTTCTGGCGCCGAATGCAAATATTTACCTCCACCCTGCGGCATTTCAGGAACGGTACAGTATCCGTAACGGAACGGC AAAACCAACATCGATGCCCGATCATGCTCGGTCGGCAATCATCAACCTGCCGCAACAACAGATTCACCGGGTAAGCAAGC CGACAATGCTCTGTTCCGGCATCGGCATTACAGGACCGATACCGAGATTAACCTCTTATGAGAATCCGGGAGGCCCGTTT TTTCTCGACACAACCGGCAAACAACCAGACCCTATCGACGACGATCTTTCGCTCTGGATTGAGAGTGAAAACGGCTTGAT CATCGTGACCGGATGCTGTCACGCAGGGTTGATCAACACGATCCGCTCTATCGTCGAACATACCGGAGAAAAGCGGATCG CCGCCCTCATCGGGGGATTCCATCTTTCAGCAGCATCAACAGAGCGGCTTGAAAAAACCGTTAAAGAGCTGAAAGAGTAC GACATCCGGCAAATCGTCCCTTGCCACTGCACCGGGAAAAATGCCACTGAGTATCTGGCTCAATTTCTCGGCTGCCCTGT TGAAGCTGGATATGCCGGACTGAAGCTGGAATTTCAGAACCCTCCCCAGGTCTGA
Upstream 100 bases:
>100_bases TTCAGATGCGGAATTCGACCATGAAAAATTCAGTATTGACAGCCACAACGTCATGCTCGGAATCCGGGTCGGGCTGTAAC CATATCAGAGTAATTCGCCC
Downstream 100 bases:
>100_bases TAAAATATTGCATCTTATCCGGCTGATCAGCCCAAACGTATTGAGTTGAGAGCATTTCGGTAAAACCGGCAACTGCGGAA ACATGAAGCCTGACCATCGA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MQQRSTTITILADNCAAPGLKTEHGLSFFIEKEDITILFDTACDNTLLYNAGALGVDLSQTELLVLSHGHYDHTGGVAEV LFLAPNANIYLHPAAFQERYSIRNGTAKPTSMPDHARSAIINLPQQQIHRVSKPTMLCSGIGITGPIPRLTSYENPGGPF FLDTTGKQPDPIDDDLSLWIESENGLIIVTGCCHAGLINTIRSIVEHTGEKRIAALIGGFHLSAASTERLEKTVKELKEY DIRQIVPCHCTGKNATEYLAQFLGCPVEAGYAGLKLEFQNPPQV
Sequences:
>Translated_284_residues MQQRSTTITILADNCAAPGLKTEHGLSFFIEKEDITILFDTACDNTLLYNAGALGVDLSQTELLVLSHGHYDHTGGVAEV LFLAPNANIYLHPAAFQERYSIRNGTAKPTSMPDHARSAIINLPQQQIHRVSKPTMLCSGIGITGPIPRLTSYENPGGPF FLDTTGKQPDPIDDDLSLWIESENGLIIVTGCCHAGLINTIRSIVEHTGEKRIAALIGGFHLSAASTERLEKTVKELKEY DIRQIVPCHCTGKNATEYLAQFLGCPVEAGYAGLKLEFQNPPQV >Mature_284_residues MQQRSTTITILADNCAAPGLKTEHGLSFFIEKEDITILFDTACDNTLLYNAGALGVDLSQTELLVLSHGHYDHTGGVAEV LFLAPNANIYLHPAAFQERYSIRNGTAKPTSMPDHARSAIINLPQQQIHRVSKPTMLCSGIGITGPIPRLTSYENPGGPF FLDTTGKQPDPIDDDLSLWIESENGLIIVTGCCHAGLINTIRSIVEHTGEKRIAALIGGFHLSAASTERLEKTVKELKEY DIRQIVPCHCTGKNATEYLAQFLGCPVEAGYAGLKLEFQNPPQV
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 30896; Mature: 30896
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRSTTITILADNCAAPGLKTEHGLSFFIEKEDITILFDTACDNTLLYNAGALGVDLSQ CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCC TELLVLSHGHYDHTGGVAEVLFLAPNANIYLHPAAFQERYSIRNGTAKPTSMPDHARSAI CEEEEEECCCCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHH INLPQQQIHRVSKPTMLCSGIGITGPIPRLTSYENPGGPFFLDTTGKQPDPIDDDLSLWI HCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE ESENGLIIVTGCCHAGLINTIRSIVEHTGEKRIAALIGGFHLSAASTERLEKTVKELKEY ECCCCEEEEECCCHHHHHHHHHHHHHHCCCHHEEHHHCCCCCCCCCHHHHHHHHHHHHHC DIRQIVPCHCTGKNATEYLAQFLGCPVEAGYAGLKLEFQNPPQV CHHHEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MQQRSTTITILADNCAAPGLKTEHGLSFFIEKEDITILFDTACDNTLLYNAGALGVDLSQ CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCC TELLVLSHGHYDHTGGVAEVLFLAPNANIYLHPAAFQERYSIRNGTAKPTSMPDHARSAI CEEEEEECCCCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHH INLPQQQIHRVSKPTMLCSGIGITGPIPRLTSYENPGGPFFLDTTGKQPDPIDDDLSLWI HCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE ESENGLIIVTGCCHAGLINTIRSIVEHTGEKRIAALIGGFHLSAASTERLEKTVKELKEY ECCCCEEEEECCCHHHHHHHHHHHHHHCCCHHEEHHHCCCCCCCCCHHHHHHHHHHHHHC DIRQIVPCHCTGKNATEYLAQFLGCPVEAGYAGLKLEFQNPPQV CHHHEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]