Click here to switch to the map view.

The map label for this gene is 119356043

Identifier: 119356043

GI number: 119356043

Start: 221628

End: 222833

Strand: Reverse

Name: 119356043

Synonym: Cpha266_0196

Alternate gene names: NA

Gene position: 222833-221628 (Counterclockwise)

Preceding gene: 119356044

Following gene: 119356042

Centisome position: 7.11

GC content: 48.76

Gene sequence:

>1206_bases
ATGAGTACTAAAAGAATTATTACGAAGGAAGATGTGCATTTAAAAGCAAGACTGCTTTCCGAAGGAGCAAAGGTAACGGT
CAACAAGCCGCCGAAGACAGGTTTCAATCCGTTTCGCGCCATGGTGCTCAATGGAAGTGATCTTGCAACTCTTGTTCGCC
CGGAACCGTATACCCGCCTTGAGGTACAGGTTAACGGGGACGATGTCGAATTTTATGATTGCGGCAAACACCTTGCAAGC
GGCAGAATGCAGGAGTGGTTCTCATGGCGCGACGGTACGTTGAGTAACGGACGCCCGGTTAATGCTGCCGTAATAGGAAT
GAACCAGGATATTATCAATATTCATTACAGTTACAGTTGCGATAACAACAATACAGGTCGGTCATGCAGATTCTGCTTTT
TCTTTGCCGACCAGCATGTATCTGTAGGGCAGGACCTGGCAAAGATGCCGTTCCAGAAAATCGAGGCTCTTGCAAAAGAG
CAGGCAGAAGCGGTTAAAATAGCAACCGATAACGGGTGGAGGGGGACTCTTGTTGTTATCGGAGGTCTTGTTGCGCCGGA
ACGTCGTTCGCAGGTTGTCGACCTTGTTGAGATTGTCATGGCGCCCTTGCGTGAACAGTTGAGTCCGGAAGTGTTTAATG
AACTGCATATAACGGCTAATTTGTATCCGCCGGATGATTTTAAGGATATGGAGCGCTGGAAGGCTTCCGGTATCAATTCA
ACAGAGTTTGATCTCGAGGTTACCGATCCAGACTATTTCAAGGCGATCTGCCCGGGGAAATGTGCAACATATCCCCTTGA
ATACTGGCATGCCGCCCAGGATGCCTCAGTTGAGATTTTCGGGCCAGGAAGGGGGACCACAAGCTTTATACTCATGGGTC
TTGAACCTATGAATTGTATGCTGGAGGGTGTTGAAGAGCGCCTGTCGAAGGGGGTATATCCCAATATGCTGGTTTACCAG
CCTGTGCCGGGAGCTGATATGTTCAGAATGCCTCCGCCAAACGCCGATTGGCTCGTTGAGGCTTCAGAGAAACTGGCAGA
CCTGTATTTCAAGTATCAGGATCGTTTTGATATGCCCCTTGCTACGGACCACAGGCCCGGTTATACGCGAATGGGACGTT
CCCAGTATATTATGCTGACAGCTGATGTAATTGCACGCAGATTGTATGAACAGGGTTATGAACTTCCTGCAGCATATCCG
GTTTAA

Upstream 100 bases:

>100_bases
GCAAAATTGTGACCGTGGACACAATGCCAACAGCCCCCTTTTGCTTGGCGAATGTTTCCTTTTATTATTTGTTTTTTCAA
TGCTAACTCATTAATACGCC

Downstream 100 bases:

>100_bases
CAGGTCATAAACAGCATAATTGCAGTTGCCGTTTACCATGCTTTTTCGATGGTAAACGGCAATTATTGTTATTAGTTATT
TTCTTGCTCTGCATTATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Elongator /MiaB/NifB; Oxidoreductase; Radical SAM Family Protein

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSTKRIITKEDVHLKARLLSEGAKVTVNKPPKTGFNPFRAMVLNGSDLATLVRPEPYTRLEVQVNGDDVEFYDCGKHLAS
GRMQEWFSWRDGTLSNGRPVNAAVIGMNQDIINIHYSYSCDNNNTGRSCRFCFFFADQHVSVGQDLAKMPFQKIEALAKE
QAEAVKIATDNGWRGTLVVIGGLVAPERRSQVVDLVEIVMAPLREQLSPEVFNELHITANLYPPDDFKDMERWKASGINS
TEFDLEVTDPDYFKAICPGKCATYPLEYWHAAQDASVEIFGPGRGTTSFILMGLEPMNCMLEGVEERLSKGVYPNMLVYQ
PVPGADMFRMPPPNADWLVEASEKLADLYFKYQDRFDMPLATDHRPGYTRMGRSQYIMLTADVIARRLYEQGYELPAAYP
V

Sequences:

>Translated_401_residues
MSTKRIITKEDVHLKARLLSEGAKVTVNKPPKTGFNPFRAMVLNGSDLATLVRPEPYTRLEVQVNGDDVEFYDCGKHLAS
GRMQEWFSWRDGTLSNGRPVNAAVIGMNQDIINIHYSYSCDNNNTGRSCRFCFFFADQHVSVGQDLAKMPFQKIEALAKE
QAEAVKIATDNGWRGTLVVIGGLVAPERRSQVVDLVEIVMAPLREQLSPEVFNELHITANLYPPDDFKDMERWKASGINS
TEFDLEVTDPDYFKAICPGKCATYPLEYWHAAQDASVEIFGPGRGTTSFILMGLEPMNCMLEGVEERLSKGVYPNMLVYQ
PVPGADMFRMPPPNADWLVEASEKLADLYFKYQDRFDMPLATDHRPGYTRMGRSQYIMLTADVIARRLYEQGYELPAAYP
V
>Mature_400_residues
STKRIITKEDVHLKARLLSEGAKVTVNKPPKTGFNPFRAMVLNGSDLATLVRPEPYTRLEVQVNGDDVEFYDCGKHLASG
RMQEWFSWRDGTLSNGRPVNAAVIGMNQDIINIHYSYSCDNNNTGRSCRFCFFFADQHVSVGQDLAKMPFQKIEALAKEQ
AEAVKIATDNGWRGTLVVIGGLVAPERRSQVVDLVEIVMAPLREQLSPEVFNELHITANLYPPDDFKDMERWKASGINST
EFDLEVTDPDYFKAICPGKCATYPLEYWHAAQDASVEIFGPGRGTTSFILMGLEPMNCMLEGVEERLSKGVYPNMLVYQP
VPGADMFRMPPPNADWLVEASEKLADLYFKYQDRFDMPLATDHRPGYTRMGRSQYIMLTADVIARRLYEQGYELPAAYPV

Specific function: Unknown

COG id: COG2516

COG function: function code R; Biotin synthase-related enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45253; Mature: 45122

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKRIITKEDVHLKARLLSEGAKVTVNKPPKTGFNPFRAMVLNGSDLATLVRPEPYTRL
CCCCCEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE
EVQVNGDDVEFYDCGKHLASGRMQEWFSWRDGTLSNGRPVNAAVIGMNQDIINIHYSYSC
EEEECCCCEEHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC
DNNNTGRSCRFCFFFADQHVSVGQDLAKMPFQKIEALAKEQAEAVKIATDNGWRGTLVVI
CCCCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEE
GGLVAPERRSQVVDLVEIVMAPLREQLSPEVFNELHITANLYPPDDFKDMERWKASGINS
ECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEEECCCCCCHHHHHHHHHCCCCC
TEFDLEVTDPDYFKAICPGKCATYPLEYWHAAQDASVEIFGPGRGTTSFILMGLEPMNCM
CEEEEEECCCHHHHEECCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHH
LEGVEERLSKGVYPNMLVYQPVPGADMFRMPPPNADWLVEASEKLADLYFKYQDRFDMPL
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCC
ATDHRPGYTRMGRSQYIMLTADVIARRLYEQGYELPAAYPV
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STKRIITKEDVHLKARLLSEGAKVTVNKPPKTGFNPFRAMVLNGSDLATLVRPEPYTRL
CCCCEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCEEE
EVQVNGDDVEFYDCGKHLASGRMQEWFSWRDGTLSNGRPVNAAVIGMNQDIINIHYSYSC
EEEECCCCEEHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC
DNNNTGRSCRFCFFFADQHVSVGQDLAKMPFQKIEALAKEQAEAVKIATDNGWRGTLVVI
CCCCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEE
GGLVAPERRSQVVDLVEIVMAPLREQLSPEVFNELHITANLYPPDDFKDMERWKASGINS
ECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEEECCCCCCHHHHHHHHHCCCCC
TEFDLEVTDPDYFKAICPGKCATYPLEYWHAAQDASVEIFGPGRGTTSFILMGLEPMNCM
CEEEEEECCCHHHHEECCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHH
LEGVEERLSKGVYPNMLVYQPVPGADMFRMPPPNADWLVEASEKLADLYFKYQDRFDMPL
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCC
ATDHRPGYTRMGRSQYIMLTADVIARRLYEQGYELPAAYPV
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA