| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356033
Identifier: 119356033
GI number: 119356033
Start: 211792
End: 212448
Strand: Reverse
Name: 119356033
Synonym: Cpha266_0186
Alternate gene names: NA
Gene position: 212448-211792 (Counterclockwise)
Preceding gene: 119356037
Following gene: 119356032
Centisome position: 6.78
GC content: 45.05
Gene sequence:
>657_bases ATGGCCATGCATGATGAGTTACCGTTCAGGATTATTTTTGCCGGGATCTACGTCGCCGGTTTCTTGATGAGAGGCTTGTT CATACAGCGCATGAAACCGCAAGAAAAACCGATAATACCTGAAGCGGGAAATGCAGGGGAAATAAGCCGTTTCAGGGTTA TTTTCCAGAAAGTAATGTTTTTTTTATGGATAGCTATCGTGGCGAGTTACACATGGTATCCACCATGGGTTGAGGCTTTG CATTTTCCTTTTCCCACATGGCTCCGTTACGGGGGCGCTATTGCTGCCGCAGTATCTTTTCTGTTTCTTTTTCTGACAAT GAAAACACTCGGAAGATACTGGAGTCCTTTGCCAAGATTGATGGAAGGGCACAAGCTTGTAATCACAGGACCCTATCGTT TTATCAGGCACCCCATGTATACCGCCATGATGTTGCTTTTTATAGCTTTTATCCTTATTACAGCGAATGCAGCCGTTACT GTGTTTAGCCTGATTGCCACTGTTTTGACTGTCAAATGGGCTTTAAATGAGGAGAAAATGCTCATAGGTTTTTTCGGGGA CGAATACCGGGCGTATATGACGCGTACGGGGGCTTTTTTGCCTGCCCCCAGGAAGATGGTTCGGCATATCTTTTTTAACC AGCACGAAAAGCTATGA
Upstream 100 bases:
>100_bases GCAAACAACTATTAACCTGACTTCACCGACCCTTTTCATTATATTTTCAGAGAGCATTAACTTTCCTCCGATGTGAGCTT GAAAAACAGTAAAACAATGT
Downstream 100 bases:
>100_bases GTTTTGCTGATACAACAAGAGGGAAGATATATTATGAAGACACCGGATGGGGTGTTAGCGACAATCGGGAAGTCGTTTTG TTTTTCAACGGCTGGTCAAT
Product: isoprenylcysteine carboxyl methyltransferase
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAMHDELPFRIIFAGIYVAGFLMRGLFIQRMKPQEKPIIPEAGNAGEISRFRVIFQKVMFFLWIAIVASYTWYPPWVEAL HFPFPTWLRYGGAIAAAVSFLFLFLTMKTLGRYWSPLPRLMEGHKLVITGPYRFIRHPMYTAMMLLFIAFILITANAAVT VFSLIATVLTVKWALNEEKMLIGFFGDEYRAYMTRTGAFLPAPRKMVRHIFFNQHEKL
Sequences:
>Translated_218_residues MAMHDELPFRIIFAGIYVAGFLMRGLFIQRMKPQEKPIIPEAGNAGEISRFRVIFQKVMFFLWIAIVASYTWYPPWVEAL HFPFPTWLRYGGAIAAAVSFLFLFLTMKTLGRYWSPLPRLMEGHKLVITGPYRFIRHPMYTAMMLLFIAFILITANAAVT VFSLIATVLTVKWALNEEKMLIGFFGDEYRAYMTRTGAFLPAPRKMVRHIFFNQHEKL >Mature_217_residues AMHDELPFRIIFAGIYVAGFLMRGLFIQRMKPQEKPIIPEAGNAGEISRFRVIFQKVMFFLWIAIVASYTWYPPWVEALH FPFPTWLRYGGAIAAAVSFLFLFLTMKTLGRYWSPLPRLMEGHKLVITGPYRFIRHPMYTAMMLLFIAFILITANAAVTV FSLIATVLTVKWALNEEKMLIGFFGDEYRAYMTRTGAFLPAPRKMVRHIFFNQHEKL
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25344; Mature: 25213
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMHDELPFRIIFAGIYVAGFLMRGLFIQRMKPQEKPIIPEAGNAGEISRFRVIFQKVMF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FLWIAIVASYTWYPPWVEALHFPFPTWLRYGGAIAAAVSFLFLFLTMKTLGRYWSPLPRL HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH MEGHKLVITGPYRFIRHPMYTAMMLLFIAFILITANAAVTVFSLIATVLTVKWALNEEKM HCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LIGFFGDEYRAYMTRTGAFLPAPRKMVRHIFFNQHEKL EEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure AMHDELPFRIIFAGIYVAGFLMRGLFIQRMKPQEKPIIPEAGNAGEISRFRVIFQKVMF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FLWIAIVASYTWYPPWVEALHFPFPTWLRYGGAIAAAVSFLFLFLTMKTLGRYWSPLPRL HHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH MEGHKLVITGPYRFIRHPMYTAMMLLFIAFILITANAAVTVFSLIATVLTVKWALNEEKM HCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LIGFFGDEYRAYMTRTGAFLPAPRKMVRHIFFNQHEKL EEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA