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The map label for this gene is rutD [H]

Identifier: 119356032

GI number: 119356032

Start: 210923

End: 211795

Strand: Reverse

Name: rutD [H]

Synonym: Cpha266_0185

Alternate gene names: 119356032

Gene position: 211795-210923 (Counterclockwise)

Preceding gene: 119356033

Following gene: 119356031

Centisome position: 6.76

GC content: 49.14

Gene sequence:

>873_bases
ATGAGTTTTGCTGATACAACAAGAGGGAAGATATATTATGAAGACACCGGATGGGGTGTTAGCGACAATCGGGAAGTCGT
TTTGTTTTTCAACGGCTGGTCAATTTCTGCAAGATACTGGATACCAGTAATAGATCGGCTATCTTCGCAGTACCGTTGCC
TTTCCTTCGATCAAAGCGGAACGGGCCGAACCGTATGCAGCCATTCGTGTCTTTCCTTTTCCGTTGAGGGGTTTGCCGAT
GAAGCGTCGGAATTGCTTGTTCATCTTGGCCTTCTCGGCTCCAGAAAGCTGCATATTGTCGGCCACTCGATGGGAGGTAT
GATCGCGACGGAAATCTGCAACCGGCATCCCGAATCCCTTGTTTCGGCAACAATTGTCAATTGTGGTATTTTCGATGACG
AACTACTCAAATCTTTCCATCATGTTCTGGTAGGCGGGATGATCGATGTTGCCATGCTCTTCAAAGGGGTATTTCTTTTG
GAACCGTTCAAATCGTTGTTCATTGATCGCGCCATTGGCAGGCCCATCGACCAGAAGTACAGAACTGTTTTCGTCGAGGA
TTTCGTGGCAAGCGACACCAGGGCAGCGACCGCTGTCGGAAAATTTGCCATAGATCCTGAAATAATAGGGAAATATACAG
CTGAAGCTGTAAAAATCGGGGCACCGCTTCTCTGTGTGGTCGGCATGGCCGACCGAACCATCCCGCCAGAAGGCATGCAA
ACCCTTTATAACAGACGCATCGAGCAAAGTGACTTCTTAACCAGGCTGGCAAGGTTCGATCATGCCGGCCATCTGCCGAT
GCTCGAAGTGCTTCCGGAGTTTGAGCAGGCTCTCCGAAACCATTTTTATGCAGCAAGCAAACTCCTCGGATAA

Upstream 100 bases:

>100_bases
TCGGGGACGAATACCGGGCGTATATGACGCGTACGGGGGCTTTTTTGCCTGCCCCCAGGAAGATGGTTCGGCATATCTTT
TTTAACCAGCACGAAAAGCT

Downstream 100 bases:

>100_bases
GCAGAGAGCGCAAGCTCCTGTTTTTTTCTGAAAAAATATTTTTTAAATTGCATACCCATACGAGGTATAGGTATGCTTGT
ATGCTGTCAGGAAATCCTGC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSFADTTRGKIYYEDTGWGVSDNREVVLFFNGWSISARYWIPVIDRLSSQYRCLSFDQSGTGRTVCSHSCLSFSVEGFAD
EASELLVHLGLLGSRKLHIVGHSMGGMIATEICNRHPESLVSATIVNCGIFDDELLKSFHHVLVGGMIDVAMLFKGVFLL
EPFKSLFIDRAIGRPIDQKYRTVFVEDFVASDTRAATAVGKFAIDPEIIGKYTAEAVKIGAPLLCVVGMADRTIPPEGMQ
TLYNRRIEQSDFLTRLARFDHAGHLPMLEVLPEFEQALRNHFYAASKLLG

Sequences:

>Translated_290_residues
MSFADTTRGKIYYEDTGWGVSDNREVVLFFNGWSISARYWIPVIDRLSSQYRCLSFDQSGTGRTVCSHSCLSFSVEGFAD
EASELLVHLGLLGSRKLHIVGHSMGGMIATEICNRHPESLVSATIVNCGIFDDELLKSFHHVLVGGMIDVAMLFKGVFLL
EPFKSLFIDRAIGRPIDQKYRTVFVEDFVASDTRAATAVGKFAIDPEIIGKYTAEAVKIGAPLLCVVGMADRTIPPEGMQ
TLYNRRIEQSDFLTRLARFDHAGHLPMLEVLPEFEQALRNHFYAASKLLG
>Mature_289_residues
SFADTTRGKIYYEDTGWGVSDNREVVLFFNGWSISARYWIPVIDRLSSQYRCLSFDQSGTGRTVCSHSCLSFSVEGFADE
ASELLVHLGLLGSRKLHIVGHSMGGMIATEICNRHPESLVSATIVNCGIFDDELLKSFHHVLVGGMIDVAMLFKGVFLLE
PFKSLFIDRAIGRPIDQKYRTVFVEDFVASDTRAATAVGKFAIDPEIIGKYTAEAVKIGAPLLCVVGMADRTIPPEGMQT
LYNRRIEQSDFLTRLARFDHAGHLPMLEVLPEFEQALRNHFYAASKLLG

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32264; Mature: 32133

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFADTTRGKIYYEDTGWGVSDNREVVLFFNGWSISARYWIPVIDRLSSQYRCLSFDQSG
CCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEHHHHHHHCCCCCEEEEECCCC
TGRTVCSHSCLSFSVEGFADEASELLVHLGLLGSRKLHIVGHSMGGMIATEICNRHPESL
CCCHHHHHHHHHEEHHCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCHHHH
VSATIVNCGIFDDELLKSFHHVLVGGMIDVAMLFKGVFLLEPFKSLFIDRAIGRPIDQKY
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RTVFVEDFVASDTRAATAVGKFAIDPEIIGKYTAEAVKIGAPLLCVVGMADRTIPPEGMQ
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
TLYNRRIEQSDFLTRLARFDHAGHLPMLEVLPEFEQALRNHFYAASKLLG
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFADTTRGKIYYEDTGWGVSDNREVVLFFNGWSISARYWIPVIDRLSSQYRCLSFDQSG
CCCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEHHHHHHHCCCCCEEEEECCCC
TGRTVCSHSCLSFSVEGFADEASELLVHLGLLGSRKLHIVGHSMGGMIATEICNRHPESL
CCCHHHHHHHHHEEHHCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCHHHH
VSATIVNCGIFDDELLKSFHHVLVGGMIDVAMLFKGVFLLEPFKSLFIDRAIGRPIDQKY
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RTVFVEDFVASDTRAATAVGKFAIDPEIIGKYTAEAVKIGAPLLCVVGMADRTIPPEGMQ
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
TLYNRRIEQSDFLTRLARFDHAGHLPMLEVLPEFEQALRNHFYAASKLLG
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA