| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356005
Identifier: 119356005
GI number: 119356005
Start: 175509
End: 176249
Strand: Reverse
Name: 119356005
Synonym: Cpha266_0156
Alternate gene names: NA
Gene position: 176249-175509 (Counterclockwise)
Preceding gene: 119356008
Following gene: 119356001
Centisome position: 5.62
GC content: 54.25
Gene sequence:
>741_bases ATGACTCCAGAGCAATTGTCGCAAACACTGGTAACAAGCGAAGAACTTGTCTACCATCCGATAGCTGTCAAATTTGTTAC TTCGCTCAGTGAGCTGCCTGAAGGAATACATAAATTCGGCGCCTCTTCAGGGGAGCGGCTTCCAAAATCATTTCTCTGCG CCATGTGGGGCGACTGTCTCAGGGGAGCAGCACCATTCTACACAACCAGAGAGCACCAGCTCTGCGGCGGCGGAGCAATA GCGGCAGGCTTCGGGAGCCTTCTGCCGCTCGAAGTTGCAGAGAAATTCATGATCGGTGACGGGAAACTGTTCGGAACGAT GAAAGCCCTTCGCTGCTCCATGGAATCAACCATGCCGTTCGAAGATGGAGAGTTTGAAGCACAGATCATAGGCCCTCTTT CTGCCATGAATAACGATACCCTTAGGCCCGATGTGGTGCTGATCGTCTGCAAGCCCTATCAGGGACAGCACATCCTGCGG GCTTACGGCTTCGACAGCGGCGAACTGGTACATGGCATAGCCGGCGGATCGACCTGTGAGATGGTGTCAAGCTATGTCAA AAAAACCGGAAAACCCACCTTCACGCTTGGCGACACCGGCGGCAATGCCGGCCTCTCCCTCGAGCCCGATGAACTGCTTC TTGCCTTTCCATACGACAAGCTCGAAACAGCCGTCAGCAATCTCTCCCGAATATGCCGCACATCGACCATGCACAGGCAT ACCATCGTTCACGAGCGCTGA
Upstream 100 bases:
>100_bases AGGTTAAATTGCCCTTCTTTCAGTGATGTTCAAATTATTGTATACTGCATGAAATCCCGAAAAACCGGCGAAGACGTCCG TAACGATTCAATGCTGAGCC
Downstream 100 bases:
>100_bases ACCGTAAAATGCTCATCCCGATGCATAATCATCACAAAAAAAATATCGCTGCAGTAACAAAAATGTCACGGCAGTTTCTC GCTGAAGCAATCGGCCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTPEQLSQTLVTSEELVYHPIAVKFVTSLSELPEGIHKFGASSGERLPKSFLCAMWGDCLRGAAPFYTTREHQLCGGGAI AAGFGSLLPLEVAEKFMIGDGKLFGTMKALRCSMESTMPFEDGEFEAQIIGPLSAMNNDTLRPDVVLIVCKPYQGQHILR AYGFDSGELVHGIAGGSTCEMVSSYVKKTGKPTFTLGDTGGNAGLSLEPDELLLAFPYDKLETAVSNLSRICRTSTMHRH TIVHER
Sequences:
>Translated_246_residues MTPEQLSQTLVTSEELVYHPIAVKFVTSLSELPEGIHKFGASSGERLPKSFLCAMWGDCLRGAAPFYTTREHQLCGGGAI AAGFGSLLPLEVAEKFMIGDGKLFGTMKALRCSMESTMPFEDGEFEAQIIGPLSAMNNDTLRPDVVLIVCKPYQGQHILR AYGFDSGELVHGIAGGSTCEMVSSYVKKTGKPTFTLGDTGGNAGLSLEPDELLLAFPYDKLETAVSNLSRICRTSTMHRH TIVHER >Mature_245_residues TPEQLSQTLVTSEELVYHPIAVKFVTSLSELPEGIHKFGASSGERLPKSFLCAMWGDCLRGAAPFYTTREHQLCGGGAIA AGFGSLLPLEVAEKFMIGDGKLFGTMKALRCSMESTMPFEDGEFEAQIIGPLSAMNNDTLRPDVVLIVCKPYQGQHILRA YGFDSGELVHGIAGGSTCEMVSSYVKKTGKPTFTLGDTGGNAGLSLEPDELLLAFPYDKLETAVSNLSRICRTSTMHRHT IVHER
Specific function: Unknown
COG id: COG2043
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26653; Mature: 26522
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEQLSQTLVTSEELVYHPIAVKFVTSLSELPEGIHKFGASSGERLPKSFLCAMWGDCL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RGAAPFYTTREHQLCGGGAIAAGFGSLLPLEVAEKFMIGDGKLFGTMKALRCSMESTMPF CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC EDGEFEAQIIGPLSAMNNDTLRPDVVLIVCKPYQGQHILRAYGFDSGELVHGIAGGSTCE CCCCEEEEEECCHHHCCCCCCCCCEEEEEECCCCCCEEHHHHCCCCCCEEEECCCCCHHH MVSSYVKKTGKPTFTLGDTGGNAGLSLEPDELLLAFPYDKLETAVSNLSRICRTSTMHRH HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH TIVHER HHCCCC >Mature Secondary Structure TPEQLSQTLVTSEELVYHPIAVKFVTSLSELPEGIHKFGASSGERLPKSFLCAMWGDCL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RGAAPFYTTREHQLCGGGAIAAGFGSLLPLEVAEKFMIGDGKLFGTMKALRCSMESTMPF CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC EDGEFEAQIIGPLSAMNNDTLRPDVVLIVCKPYQGQHILRAYGFDSGELVHGIAGGSTCE CCCCEEEEEECCHHHCCCCCCCCCEEEEEECCCCCCEEHHHHCCCCCCEEEECCCCCHHH MVSSYVKKTGKPTFTLGDTGGNAGLSLEPDELLLAFPYDKLETAVSNLSRICRTSTMHRH HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH TIVHER HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA