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The map label for this gene is 119355941

Identifier: 119355941

GI number: 119355941

Start: 106689

End: 107087

Strand: Reverse

Name: 119355941

Synonym: Cpha266_0091

Alternate gene names: NA

Gene position: 107087-106689 (Counterclockwise)

Preceding gene: 119355942

Following gene: 119355939

Centisome position: 3.42

GC content: 48.62

Gene sequence:

>399_bases
GTGAGATATCTGCTCGATACCAATATCTGCATCTATATCATCAACTCCCGACCCGCAGATGTACTGAAACGTTTCCGTCA
GGAACAAATCGGCACTATCGGAATATCTTCGATAACGGCGGCTGAGCTGACATTCGGAGTTATAAAGAGCGGCTCCGAAA
AAAATCGGCGCGCATTGGAAATGTTTTTCACCCCGCTGGAAATCCTGCCTTTCGACGGATCGATAATATGGCACTATGGC
CGGTTGCGTTACTACCTTGAAAAACTAGGCCAGCCAATCGGGGCTCTTGACACCATGATCGCATCACATGCTCTCGCACT
GGACACTGTTCTGGTAACGAACAATGTCCGCGAGTTCATGAGGGTTCCCGGACTTCGTTATGAAAACTGGGCTGAATAA

Upstream 100 bases:

>100_bases
AATCATGGGCAACGCTGGAAGCAGCGCTTGAGGAATTCGAGCCGGAATTCAAACTGGAACGGGAGCAGCCCGAAGCTGAA
AAAAGGGAAGCGATTGCATC

Downstream 100 bases:

>100_bases
CAGCCCTTTTCTAATCCCCCTCATCCGGCTCGAAATCGAGCACTATCGAATTCATGCAGAACCTTTTGCCTGTCGGCGGC
GGTCCGTCGTCGAACACGTG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRYLLDTNICIYIINSRPADVLKRFRQEQIGTIGISSITAAELTFGVIKSGSEKNRRALEMFFTPLEILPFDGSIIWHYG
RLRYYLEKLGQPIGALDTMIASHALALDTVLVTNNVREFMRVPGLRYENWAE

Sequences:

>Translated_132_residues
MRYLLDTNICIYIINSRPADVLKRFRQEQIGTIGISSITAAELTFGVIKSGSEKNRRALEMFFTPLEILPFDGSIIWHYG
RLRYYLEKLGQPIGALDTMIASHALALDTVLVTNNVREFMRVPGLRYENWAE
>Mature_132_residues
MRYLLDTNICIYIINSRPADVLKRFRQEQIGTIGISSITAAELTFGVIKSGSEKNRRALEMFFTPLEILPFDGSIIWHYG
RLRYYLEKLGQPIGALDTMIASHALALDTVLVTNNVREFMRVPGLRYENWAE

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15126; Mature: 15126

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLLDTNICIYIINSRPADVLKRFRQEQIGTIGISSITAAELTFGVIKSGSEKNRRALE
CCEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
MFFTPLEILPFDGSIIWHYGRLRYYLEKLGQPIGALDTMIASHALALDTVLVTNNVREFM
HHHCCHHEEECCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVPGLRYENWAE
HCCCCCCCCCCC
>Mature Secondary Structure
MRYLLDTNICIYIINSRPADVLKRFRQEQIGTIGISSITAAELTFGVIKSGSEKNRRALE
CCEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
MFFTPLEILPFDGSIIWHYGRLRYYLEKLGQPIGALDTMIASHALALDTVLVTNNVREFM
HHHCCHHEEECCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVPGLRYENWAE
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]