| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355936
Identifier: 119355936
GI number: 119355936
Start: 102059
End: 102997
Strand: Reverse
Name: 119355936
Synonym: Cpha266_0086
Alternate gene names: NA
Gene position: 102997-102059 (Counterclockwise)
Preceding gene: 119355938
Following gene: 119355935
Centisome position: 3.29
GC content: 57.29
Gene sequence:
>939_bases ATGAAAAGGATCACCATCCCCGCACTGCTTGCGATCATGCTCCTCCTGTGTCAATCGCTGAGTTTCGCGGCCGTCAGTCA GTTTACCGGCACATGGAAAAACACCGATCCGAACACAGCAGGAGTCACAAAGCTGAGCATCACCGGAAACGGCAACTCCC TGAGAATGCGCGCCTGGGGCAAATGCCACCCGCAGGACTGCGACTGGGGCGAAGTCAACGCCTATGCCTACGCTCCCGGC GTATCCTCGGATATCGATCAGAACGCCCAGGCAGTATCGGCACTCTTCACCACCGGCTTCAGCCAGACGCTGGTCATCGT CAGACCGATCAGCAGAAGCTCCATTCGCGCCGACATCTACACCCGGTTTACCGACAACAGCGGACGCTCGAACTATACGG CATCCTACACCTTCAACCGGCAGCTGATCGTCGGTCCCATCGGCCCGATAGGCCCTATAGGGCCGATACGCCCCATGCCG TCAGTTGAAGAGGATTGCATTTCGTTCAACCCGAGCACAGTTACCGTTAAAAACCTTGACGGACGCTGGACGATAGTCGA TGGCAACCACCTCATGTTCAACTTCGGCCCGAACAGAACGGAAGCGCTGCAGGCGTTGAGAATCATCAAACACTACCGGA TGAACAGTTCCTGCTTCGTCGGTCGCCCCGACCCCAGCTTCCAGTACCTGCTTGTTAACGGCAGGGCGCCGCAGGGCAAC ATGCCCGGCGAGGACTGCGTATCGTTCAACCCGAACACCATCGAAGTGAGGAACATCGGCGGAAGCTGGAAAATCGTCGA CGGCAGTCACTGGGTTTTCGATTTCGGCAGCAAGGAAGACGAAGCGAGAAAAGCCTTCGCCATCATCAAGAAGTACGGCT TCACCCGCAGCTGCTTCGTCGGTCGCCCCGACCCGAGCTTCCAGTACCTGAAGAAGTAA
Upstream 100 bases:
>100_bases ACATGAGGATTTCGAGCACCGACCAACGCAGCAATTTGGGTGCGCAATAACTTTATAGAGGTATCCTCAACTTGCCCTCC ACTTTTCAACAGGAAATAAC
Downstream 100 bases:
>100_bases TCGCTTCGGCAGCATGAACAGTAAAAACCCCTCGGTTTCGAGCATGAAGCCGGGGGTTTTTATTAGTTATACTCAAAATC AACCTTTCGTTATTGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWGKCHPQDCDWGEVNAYAYAPG VSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIYTRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMP SVEEDCISFNPSTVTVKNLDGRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFVGRPDPSFQYLKK
Sequences:
>Translated_312_residues MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWGKCHPQDCDWGEVNAYAYAPG VSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIYTRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMP SVEEDCISFNPSTVTVKNLDGRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFVGRPDPSFQYLKK >Mature_312_residues MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWGKCHPQDCDWGEVNAYAYAPG VSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIYTRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMP SVEEDCISFNPSTVTVKNLDGRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFVGRPDPSFQYLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34542; Mature: 34542
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWG CCEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC KCHPQDCDWGEVNAYAYAPGVSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIY CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE TRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMPSVEEDCISFNPSTVTVKNLD EEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECC GRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN CEEEEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFV CCCHHCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEC GRPDPSFQYLKK CCCCCCHHHHCC >Mature Secondary Structure MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWG CCEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC KCHPQDCDWGEVNAYAYAPGVSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIY CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE TRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMPSVEEDCISFNPSTVTVKNLD EEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECC GRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN CEEEEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFV CCCHHCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEC GRPDPSFQYLKK CCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA