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The map label for this gene is ctpA [H]

Identifier: 119355892

GI number: 119355892

Start: 43349

End: 45067

Strand: Direct

Name: ctpA [H]

Synonym: Cpha266_0042

Alternate gene names: 119355892

Gene position: 43349-45067 (Clockwise)

Preceding gene: 119355891

Following gene: 119355900

Centisome position: 1.38

GC content: 50.79

Gene sequence:

>1719_bases
ATGACATGCGGCAAACACATGCGTCAGTGCTTATGCCGGGCGCTGATCTCGGCAGGCGCGGCCTCATTATTGTTCGTTAT
TGTTCCGGTTTTGGGGATTCATGCCGCCGAGCATGATAAAGAGTATGCCGAGACGGGTAAAAGTATTGAGCTTTTTGGTC
ATGTGGTTCGAGAGCTTTCGGAAAAATATGTCGATACGGTTGATGTCGGTAAACTGATCTATATCGGTATTGACGGGGTG
CTTGAATCCCTTGATCCCTATACGGTTTTTCTCGATGCCGGACAATCCGAAGAGCTTGGCGAGATCACCAGCGGGCAGTA
TGCCGGTATAGGTTTAGGCCTGTCAAAGTTTGGCGGCGCAGCTTATGTAACGTCTGTCGTCGAAGGATATCCCGCATGGA
AGGCCGGGATCAGAACAGGCGATCGCATCATGGCAATCAACGGCGTTTCGCTGTCGAAAAGCAATATTGATAATCTCAGG
GAGATGATAAAGGGCCCTGCGGGGGGATCGCTGACCGTCAAAATCGAGCGGGAAAAGAGCGGCCGGCCGCCAGCTCCAGA
GACGGTAACGCTTGTCAGGCAGGCGGTTCATCTCAACACGGTCAGTTTTGCCGGTATCGTCGATGGCGTGGCCTATATCG
TTATGGACAGTTTCAGCGCCAAGTCTGCCGAGGAGCTCAGCGCTGCGCTGCAAAAACTGATGAAAGAGTCGGAACCCGAA
GGTCGTTCTCTCAAGGGTGTTGTGCTTGATCTTCGGGGTAATCCCGGTGGACTGTTGACATCCGCAATAGATGTTGCCGG
GCTTTTTGTCGAAAAAGGGAGTGAGGTTTTATCGATACGTGGACGGCATCCCGAAGACCGTCAGGCCTATACGACGCAGC
AGAGCCCCTTTTCATCGACCATTCCTCTTGTTGTTCTGATTGACGGCCAAAGCGCATCTGCCTCGGAAATTGTTTCAGGC
GCCATTCAGGATCTGGATCGGGGAATTATTATCGGGGAACGATCTTTCGGTAAGGGGCTTGTGCAATCAATTGTAGAACT
GCCTTTCAATTACAGCATTAAACTGACGACGGCAAAATATTACACACCAAGCGGTCGGTTGATACAGAAAGATTTGCATT
CCGAAACCGAGCTCATCAAAGAAGGGGATGTTCCTCCTGCCGGAAAGGAGAAGAGGGCAAAGGTATATTATACGGCTAAA
AAACGATCGGTTTATGGTGGCGGGGGAATACTGCCGGATATAAGCGTATCGGCGGTGATGCTTTCTGAATACGAAAAGGC
GCTTGTCAAAGATGGCCTGATTTTTCGTTTTGCCATATCGTATCACAGCGAACACGCCGAGCAGCCGACGCTTCCTCTTG
ATCATCCTTCGCTGTTGCTGGCGTTCGACAAGTTTCTTGAAGATCAGAAGTTCAGCTATACTTCGCAGCCTGAACAGGAG
TTTGAAAAGCTCAGAACCCTGTTGATCAAGGAGACTCCTTCTGACGGCAATAGCGAAGCCTCTGCTCTCCTGGGAATGAA
AGAAGAGATTGTCCGCCGGAAGCGGTTGGAACTCAGCAGAAACAGGGAGCATATTGCCCGTTTGCTTGAACTTGAAATTC
TTCGTCACTACAGCGAAACCGGCGCTAAACGTGCCGGTCTTCATGACGATCCCGTTGTGCGGACTGCGTTGGAACTGCTC
TCCGATAAAAAGAGGTATTCCGGTATTCTCTCACGCTGA

Upstream 100 bases:

>100_bases
AGTATCGTGATGAAAAAACCGACAGCGCTACTGCCCTTGAACAAGCTCTGAGATAAACAATGGTCTATGGATTCAGTCGT
AGCAGCCGGAGTGTCAGCGT

Downstream 100 bases:

>100_bases
TTCCGCTTTTTTCGCCAGTTTTTCGTACCATACCGTCTGTCGGTGAATACCGATAACGATCATGAGGTTGCTGAGCGTCA
GCAGGCTTTCAGCCAGGCCG

Product: C-terminal processing peptidase-3

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MTCGKHMRQCLCRALISAGAASLLFVIVPVLGIHAAEHDKEYAETGKSIELFGHVVRELSEKYVDTVDVGKLIYIGIDGV
LESLDPYTVFLDAGQSEELGEITSGQYAGIGLGLSKFGGAAYVTSVVEGYPAWKAGIRTGDRIMAINGVSLSKSNIDNLR
EMIKGPAGGSLTVKIEREKSGRPPAPETVTLVRQAVHLNTVSFAGIVDGVAYIVMDSFSAKSAEELSAALQKLMKESEPE
GRSLKGVVLDLRGNPGGLLTSAIDVAGLFVEKGSEVLSIRGRHPEDRQAYTTQQSPFSSTIPLVVLIDGQSASASEIVSG
AIQDLDRGIIIGERSFGKGLVQSIVELPFNYSIKLTTAKYYTPSGRLIQKDLHSETELIKEGDVPPAGKEKRAKVYYTAK
KRSVYGGGGILPDISVSAVMLSEYEKALVKDGLIFRFAISYHSEHAEQPTLPLDHPSLLLAFDKFLEDQKFSYTSQPEQE
FEKLRTLLIKETPSDGNSEASALLGMKEEIVRRKRLELSRNREHIARLLELEILRHYSETGAKRAGLHDDPVVRTALELL
SDKKRYSGILSR

Sequences:

>Translated_572_residues
MTCGKHMRQCLCRALISAGAASLLFVIVPVLGIHAAEHDKEYAETGKSIELFGHVVRELSEKYVDTVDVGKLIYIGIDGV
LESLDPYTVFLDAGQSEELGEITSGQYAGIGLGLSKFGGAAYVTSVVEGYPAWKAGIRTGDRIMAINGVSLSKSNIDNLR
EMIKGPAGGSLTVKIEREKSGRPPAPETVTLVRQAVHLNTVSFAGIVDGVAYIVMDSFSAKSAEELSAALQKLMKESEPE
GRSLKGVVLDLRGNPGGLLTSAIDVAGLFVEKGSEVLSIRGRHPEDRQAYTTQQSPFSSTIPLVVLIDGQSASASEIVSG
AIQDLDRGIIIGERSFGKGLVQSIVELPFNYSIKLTTAKYYTPSGRLIQKDLHSETELIKEGDVPPAGKEKRAKVYYTAK
KRSVYGGGGILPDISVSAVMLSEYEKALVKDGLIFRFAISYHSEHAEQPTLPLDHPSLLLAFDKFLEDQKFSYTSQPEQE
FEKLRTLLIKETPSDGNSEASALLGMKEEIVRRKRLELSRNREHIARLLELEILRHYSETGAKRAGLHDDPVVRTALELL
SDKKRYSGILSR
>Mature_571_residues
TCGKHMRQCLCRALISAGAASLLFVIVPVLGIHAAEHDKEYAETGKSIELFGHVVRELSEKYVDTVDVGKLIYIGIDGVL
ESLDPYTVFLDAGQSEELGEITSGQYAGIGLGLSKFGGAAYVTSVVEGYPAWKAGIRTGDRIMAINGVSLSKSNIDNLRE
MIKGPAGGSLTVKIEREKSGRPPAPETVTLVRQAVHLNTVSFAGIVDGVAYIVMDSFSAKSAEELSAALQKLMKESEPEG
RSLKGVVLDLRGNPGGLLTSAIDVAGLFVEKGSEVLSIRGRHPEDRQAYTTQQSPFSSTIPLVVLIDGQSASASEIVSGA
IQDLDRGIIIGERSFGKGLVQSIVELPFNYSIKLTTAKYYTPSGRLIQKDLHSETELIKEGDVPPAGKEKRAKVYYTAKK
RSVYGGGGILPDISVSAVMLSEYEKALVKDGLIFRFAISYHSEHAEQPTLPLDHPSLLLAFDKFLEDQKFSYTSQPEQEF
EKLRTLLIKETPSDGNSEASALLGMKEEIVRRKRLELSRNREHIARLLELEILRHYSETGAKRAGLHDDPVVRTALELLS
DKKRYSGILSR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=355, Percent_Identity=29.5774647887324, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 62322; Mature: 62191

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCGKHMRQCLCRALISAGAASLLFVIVPVLGIHAAEHDKEYAETGKSIELFGHVVRELS
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHH
EKYVDTVDVGKLIYIGIDGVLESLDPYTVFLDAGQSEELGEITSGQYAGIGLGLSKFGGA
HHHCCHHCCCCEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEECCHHHHCCH
AYVTSVVEGYPAWKAGIRTGDRIMAINGVSLSKSNIDNLREMIKGPAGGSLTVKIEREKS
HHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCC
GRPPAPETVTLVRQAVHLNTVSFAGIVDGVAYIVMDSFSAKSAEELSAALQKLMKESEPE
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
GRSLKGVVLDLRGNPGGLLTSAIDVAGLFVEKGSEVLSIRGRHPEDRQAYTTQQSPFSST
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCCCCCC
IPLVVLIDGQSASASEIVSGAIQDLDRGIIIGERSFGKGLVQSIVELPFNYSIKLTTAKY
CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEE
YTPSGRLIQKDLHSETELIKEGDVPPAGKEKRAKVYYTAKKRSVYGGGGILPDISVSAVM
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEECCCCCCCCCCHHHHHH
LSEYEKALVKDGLIFRFAISYHSEHAEQPTLPLDHPSLLLAFDKFLEDQKFSYTSQPEQE
HHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
FEKLRTLLIKETPSDGNSEASALLGMKEEIVRRKRLELSRNREHIARLLELEILRHYSET
HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAKRAGLHDDPVVRTALELLSDKKRYSGILSR
CHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TCGKHMRQCLCRALISAGAASLLFVIVPVLGIHAAEHDKEYAETGKSIELFGHVVRELS
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHH
EKYVDTVDVGKLIYIGIDGVLESLDPYTVFLDAGQSEELGEITSGQYAGIGLGLSKFGGA
HHHCCHHCCCCEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEECCHHHHCCH
AYVTSVVEGYPAWKAGIRTGDRIMAINGVSLSKSNIDNLREMIKGPAGGSLTVKIEREKS
HHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCC
GRPPAPETVTLVRQAVHLNTVSFAGIVDGVAYIVMDSFSAKSAEELSAALQKLMKESEPE
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
GRSLKGVVLDLRGNPGGLLTSAIDVAGLFVEKGSEVLSIRGRHPEDRQAYTTQQSPFSST
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCCCCCC
IPLVVLIDGQSASASEIVSGAIQDLDRGIIIGERSFGKGLVQSIVELPFNYSIKLTTAKY
CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEE
YTPSGRLIQKDLHSETELIKEGDVPPAGKEKRAKVYYTAKKRSVYGGGGILPDISVSAVM
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEECCCCCCCCCCHHHHHH
LSEYEKALVKDGLIFRFAISYHSEHAEQPTLPLDHPSLLLAFDKFLEDQKFSYTSQPEQE
HHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
FEKLRTLLIKETPSDGNSEASALLGMKEEIVRRKRLELSRNREHIARLLELEILRHYSET
HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAKRAGLHDDPVVRTALELLSDKKRYSGILSR
CHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]