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The map label for this gene is secF [H]

Identifier: 119355884

GI number: 119355884

Start: 34277

End: 35212

Strand: Direct

Name: secF [H]

Synonym: Cpha266_0034

Alternate gene names: 119355884

Gene position: 34277-35212 (Clockwise)

Preceding gene: 119355883

Following gene: 119355885

Centisome position: 1.09

GC content: 46.15

Gene sequence:

>936_bases
ATGAGGATTTTTCATAAAACAAGCTTTGATTTTATCAAGTATCGCAAAATCAGCTATGCCATTTCAGTGTTTCTTCTCCT
TATCGGCATTGGTTCTCTTTTTGTCAAGGGACTGAACTACGGAATTGATTTCAGGGGAGGTTCCGAGGTGCTCATAAGGT
TTGAAAAAAATATCGACGTTGCTGCCGTTCGCAGCGTTCTTGACAATACCGGCATGTCAGGCACGCTCAAACAGTACGGT
CTTGATCGTTCGTTTCTTTTTAGCACGGCGTTCAATGGTCAGACCAATGAATTGAAATCCCTTATATCGAATTCTTTGAA
TGATCGTCTCAAGGGAAATCCTCACGAGATCGTTCGTATCGATGCTGTCGGCCCGAGTATTGCTTCTGATTTGAAATGGT
CGGCTCTCAAGGCCCTTCTGGCCGCGCTTCTGGCCATTCTTCTCTATGTCGGGATACGATTCGAGATTAAATTCGCGACG
GCAGGAGTTGTTGCCATTTTTCACGATATCTTCGTTGTGCTCGGCCTATTCAGCCTTCTTGGCGGAGTGTTCGATTTTAT
GCCTCTGGAACTGGATCAGAGTATCATTGCTGCGTTTCTGACTATTGCAGGTTATTCAATCACCGATACCGTCGTTGTCT
ATGACCGGATCAGGGAGAGAATTCGAGGCCAGAAGCCTGCTGATTATGAAAGGATATTCAATGAGAGCATGAATCAAACC
CTGAGTCGGACGATCATTACCTCCGGGACTCTGCTTATTTCGGTTCTGGTGCTGTTCGTTTTTGCCGGTCCGGCTATCAG
AGGGTTTGCGTTTGCCGTGTTTATGGGAGTTTTTATTGGCACCTATTCCTCTATTTTCGTTGCCGCTCCCATTGTATATG
ACTGGCTGAAGCTGACAAAATCTTCGGTTAAACTAAGGGGCGGCAGCGCGAGCTGA

Upstream 100 bases:

>100_bases
ACCGCAATTGTTGTTACCAGGGAGATATTCACTATCCTGCTCGGCAGGAACATGATGACGGAAAAAAGTTTCGGTTAATT
TTTTCAATACGCATTGACCT

Downstream 100 bases:

>100_bases
GCCGCTGTATCGATGGTTCCCGGTATCGAGAGTTCCTTTTTGTTGCGAAGCAACAAGTTTCTCTTTATGTTGTTCTTATC
ATGCGGCTTTGCAGGGCTGT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRIFHKTSFDFIKYRKISYAISVFLLLIGIGSLFVKGLNYGIDFRGGSEVLIRFEKNIDVAAVRSVLDNTGMSGTLKQYG
LDRSFLFSTAFNGQTNELKSLISNSLNDRLKGNPHEIVRIDAVGPSIASDLKWSALKALLAALLAILLYVGIRFEIKFAT
AGVVAIFHDIFVVLGLFSLLGGVFDFMPLELDQSIIAAFLTIAGYSITDTVVVYDRIRERIRGQKPADYERIFNESMNQT
LSRTIITSGTLLISVLVLFVFAGPAIRGFAFAVFMGVFIGTYSSIFVAAPIVYDWLKLTKSSVKLRGGSAS

Sequences:

>Translated_311_residues
MRIFHKTSFDFIKYRKISYAISVFLLLIGIGSLFVKGLNYGIDFRGGSEVLIRFEKNIDVAAVRSVLDNTGMSGTLKQYG
LDRSFLFSTAFNGQTNELKSLISNSLNDRLKGNPHEIVRIDAVGPSIASDLKWSALKALLAALLAILLYVGIRFEIKFAT
AGVVAIFHDIFVVLGLFSLLGGVFDFMPLELDQSIIAAFLTIAGYSITDTVVVYDRIRERIRGQKPADYERIFNESMNQT
LSRTIITSGTLLISVLVLFVFAGPAIRGFAFAVFMGVFIGTYSSIFVAAPIVYDWLKLTKSSVKLRGGSAS
>Mature_311_residues
MRIFHKTSFDFIKYRKISYAISVFLLLIGIGSLFVKGLNYGIDFRGGSEVLIRFEKNIDVAAVRSVLDNTGMSGTLKQYG
LDRSFLFSTAFNGQTNELKSLISNSLNDRLKGNPHEIVRIDAVGPSIASDLKWSALKALLAALLAILLYVGIRFEIKFAT
AGVVAIFHDIFVVLGLFSLLGGVFDFMPLELDQSIIAAFLTIAGYSITDTVVVYDRIRERIRGQKPADYERIFNESMNQT
LSRTIITSGTLLISVLVLFVFAGPAIRGFAFAVFMGVFIGTYSSIFVAAPIVYDWLKLTKSSVKLRGGSAS

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=287, Percent_Identity=37.6306620209059, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34249; Mature: 34249

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFHKTSFDFIKYRKISYAISVFLLLIGIGSLFVKGLNYGIDFRGGSEVLIRFEKNIDV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCH
AAVRSVLDNTGMSGTLKQYGLDRSFLFSTAFNGQTNELKSLISNSLNDRLKGNPHEIVRI
HHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
DAVGPSIASDLKWSALKALLAALLAILLYVGIRFEIKFATAGVVAIFHDIFVVLGLFSLL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
GGVFDFMPLELDQSIIAAFLTIAGYSITDTVVVYDRIRERIRGQKPADYERIFNESMNQT
HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSRTIITSGTLLISVLVLFVFAGPAIRGFAFAVFMGVFIGTYSSIFVAAPIVYDWLKLTK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSVKLRGGSAS
HHHEECCCCCC
>Mature Secondary Structure
MRIFHKTSFDFIKYRKISYAISVFLLLIGIGSLFVKGLNYGIDFRGGSEVLIRFEKNIDV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCH
AAVRSVLDNTGMSGTLKQYGLDRSFLFSTAFNGQTNELKSLISNSLNDRLKGNPHEIVRI
HHHHHHHHCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
DAVGPSIASDLKWSALKALLAALLAILLYVGIRFEIKFATAGVVAIFHDIFVVLGLFSLL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
GGVFDFMPLELDQSIIAAFLTIAGYSITDTVVVYDRIRERIRGQKPADYERIFNESMNQT
HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSRTIITSGTLLISVLVLFVFAGPAIRGFAFAVFMGVFIGTYSSIFVAAPIVYDWLKLTK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSVKLRGGSAS
HHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]