| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581956
Identifier: 118581956
GI number: 118581956
Start: 3931192
End: 3931878
Strand: Direct
Name: 118581956
Synonym: Ppro_3557
Alternate gene names: NA
Gene position: 3931192-3931878 (Clockwise)
Preceding gene: 118581955
Following gene: 118581957
Centisome position: 98.08
GC content: 44.54
Gene sequence:
>687_bases ATGCCTGCTAACACATCTAAGTTACTTGTCTTGCTTGTCCTTCTCACCGTAGCGTCCAATGCTCAAGCTACGTTATATGA TCGTGGCGGTGGCTTGCTATACGACGATGTACTTAACATCACTTGGCTTCAGGACGCTAATTACTCCAAGACAAGTGGTT ACGACACAGATGGGTTGATGAACTGGAGTTCAGCGAACACTTGGGCTAACACTCTTTCCTACTATGACAGTGTACGCAAT GTAACGTACGATAACTGGCGCCTAGCAAGTTATACACAGCCAGGACGCCCTGTTCATTATAGTTGGTGGTATAGTGTTTC CGATTGGATACCAGATGTCGATAGTGAATTGAGCTATATGTTTTATTCGAATCTTGGACAGAACCACTCTGGCATTTTCG GCAATTATCAAATCGGAGGTCAAAGAAGCGTCGGGCTGGTGAACAACATTCAATCAGACAGATATGTGCTTGGTGATACC GCGCCTGATGGATACCGGAATTTAATACCATGGGCCTTTTTATTCAACGACGGTGAACATATTGAATTTAACGAATATGC AAAAGCATATGCTTGGGCTGTACGTGACGGAGATGTTGCATCCATGGCTTCGCCTGTTCCAGAACCTTCAATAATGATCC TTCTAGGTGGTGGTCTTGCTGTTCTTGCCTTCTGGAGAAGAAAGTAA
Upstream 100 bases:
>100_bases TGTCTGTAAGCCAGCTTATTCAGTAACCGCCCAAATGACGAAGAACCCATATCACCCTCACGAAACAACGAAGAACAAAT TTTAAAGGAAATCTTACCTC
Downstream 100 bases:
>100_bases ATTCATATTCAATAAACTATCTAGACAATAAAGAATTTCCAAAATCAGTTAGTCATACTTTATTCAATCAATACAAAGGA ACAACATTGAAAAAATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MPANTSKLLVLLVLLTVASNAQATLYDRGGGLLYDDVLNITWLQDANYSKTSGYDTDGLMNWSSANTWANTLSYYDSVRN VTYDNWRLASYTQPGRPVHYSWWYSVSDWIPDVDSELSYMFYSNLGQNHSGIFGNYQIGGQRSVGLVNNIQSDRYVLGDT APDGYRNLIPWAFLFNDGEHIEFNEYAKAYAWAVRDGDVASMASPVPEPSIMILLGGGLAVLAFWRRK
Sequences:
>Translated_228_residues MPANTSKLLVLLVLLTVASNAQATLYDRGGGLLYDDVLNITWLQDANYSKTSGYDTDGLMNWSSANTWANTLSYYDSVRN VTYDNWRLASYTQPGRPVHYSWWYSVSDWIPDVDSELSYMFYSNLGQNHSGIFGNYQIGGQRSVGLVNNIQSDRYVLGDT APDGYRNLIPWAFLFNDGEHIEFNEYAKAYAWAVRDGDVASMASPVPEPSIMILLGGGLAVLAFWRRK >Mature_227_residues PANTSKLLVLLVLLTVASNAQATLYDRGGGLLYDDVLNITWLQDANYSKTSGYDTDGLMNWSSANTWANTLSYYDSVRNV TYDNWRLASYTQPGRPVHYSWWYSVSDWIPDVDSELSYMFYSNLGQNHSGIFGNYQIGGQRSVGLVNNIQSDRYVLGDTA PDGYRNLIPWAFLFNDGEHIEFNEYAKAYAWAVRDGDVASMASPVPEPSIMILLGGGLAVLAFWRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25617; Mature: 25486
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANTSKLLVLLVLLTVASNAQATLYDRGGGLLYDDVLNITWLQDANYSKTSGYDTDGLM CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHEEEEEEECCCCCCCCCCCCCCEE NWSSANTWANTLSYYDSVRNVTYDNWRLASYTQPGRPVHYSWWYSVSDWIPDVDSELSYM CCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEEHHCCCCCCCHHHHHH FYSNLGQNHSGIFGNYQIGGQRSVGLVNNIQSDRYVLGDTAPDGYRNLIPWAFLFNDGEH HHHHCCCCCCCCEEEEEECCCCCCCHHHCCCCCCEEEECCCCCCHHHCCCEEEEECCCCE IEFNEYAKAYAWAVRDGDVASMASPVPEPSIMILLGGGLAVLAFWRRK EEHHHHHHEEEEEECCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHCC >Mature Secondary Structure PANTSKLLVLLVLLTVASNAQATLYDRGGGLLYDDVLNITWLQDANYSKTSGYDTDGLM CCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHEEEEEEECCCCCCCCCCCCCCEE NWSSANTWANTLSYYDSVRNVTYDNWRLASYTQPGRPVHYSWWYSVSDWIPDVDSELSYM CCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEEHHCCCCCCCHHHHHH FYSNLGQNHSGIFGNYQIGGQRSVGLVNNIQSDRYVLGDTAPDGYRNLIPWAFLFNDGEH HHHHCCCCCCCCEEEEEECCCCCCCHHHCCCCCCEEEECCCCCCHHHCCCEEEEECCCCE IEFNEYAKAYAWAVRDGDVASMASPVPEPSIMILLGGGLAVLAFWRRK EEHHHHHHEEEEEECCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA