| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581955
Identifier: 118581955
GI number: 118581955
Start: 3930490
End: 3930945
Strand: Direct
Name: 118581955
Synonym: Ppro_3556
Alternate gene names: NA
Gene position: 3930490-3930945 (Clockwise)
Preceding gene: 118581954
Following gene: 118581956
Centisome position: 98.07
GC content: 37.94
Gene sequence:
>456_bases ATGGACTTGAATGAAAAAATAGCCGCACGCAGGAGAGAATTGGCTGCTGAGGACGAAAAGACCAAGCAAGCAGAGAAAGC TAGAGAGGCAGAGCAGCAAAGATATGTTCGTAATGAAGCAATCAAACAACTTTCAGAAAATGGAATTGAATTGCCTGATT ACAAGGGAATTCCTTTGGAAAAAGTTGATGCAGAAGTAGAAAAACTTCTTGATAAGGCAGCCAGTGATAGAATGACTTCA GGTGAAAACACAACACTTATAGTACTTTTTGTTTTTGGCTTATTGAGCTTTTTAATTACATGGTGGTTGGGTGTTTTTTT CATAATAGGTGCTTTTGTTTACTCTTCTAAAACAACAAACCGATACAAGGAGCAAATTAAAGCTGAAGGAAAGGTACAAC TCGAACAGAACCAGCGGAATTTGGAAGAGCGATTGAAAAACTCTTCGTCATTTTGA
Upstream 100 bases:
>100_bases GCTGGAGCTACTGGGATGGCAGTTGTCGGTAGCGGATTAATCGGCGCATTAGTAAATAGCATTGGTAGCGATGAGTAATT ACAGTTTAAAGAGGTGAATA
Downstream 100 bases:
>100_bases GTGGTACCATTGAGGCCATTTGGAAAACTAGACTACCTTCCAATTTCACCGTGGTCATATTCAATATTGCGCGACACCAA TCAACTTGTTCAATATCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MDLNEKIAARRRELAAEDEKTKQAEKAREAEQQRYVRNEAIKQLSENGIELPDYKGIPLEKVDAEVEKLLDKAASDRMTS GENTTLIVLFVFGLLSFLITWWLGVFFIIGAFVYSSKTTNRYKEQIKAEGKVQLEQNQRNLEERLKNSSSF
Sequences:
>Translated_151_residues MDLNEKIAARRRELAAEDEKTKQAEKAREAEQQRYVRNEAIKQLSENGIELPDYKGIPLEKVDAEVEKLLDKAASDRMTS GENTTLIVLFVFGLLSFLITWWLGVFFIIGAFVYSSKTTNRYKEQIKAEGKVQLEQNQRNLEERLKNSSSF >Mature_151_residues MDLNEKIAARRRELAAEDEKTKQAEKAREAEQQRYVRNEAIKQLSENGIELPDYKGIPLEKVDAEVEKLLDKAASDRMTS GENTTLIVLFVFGLLSFLITWWLGVFFIIGAFVYSSKTTNRYKEQIKAEGKVQLEQNQRNLEERLKNSSSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17405; Mature: 17405
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLNEKIAARRRELAAEDEKTKQAEKAREAEQQRYVRNEAIKQLSENGIELPDYKGIPLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH KVDAEVEKLLDKAASDRMTSGENTTLIVLFVFGLLSFLITWWLGVFFIIGAFVYSSKTTN HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RYKEQIKAEGKVQLEQNQRNLEERLKNSSSF HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLNEKIAARRRELAAEDEKTKQAEKAREAEQQRYVRNEAIKQLSENGIELPDYKGIPLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH KVDAEVEKLLDKAASDRMTSGENTTLIVLFVFGLLSFLITWWLGVFFIIGAFVYSSKTTN HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RYKEQIKAEGKVQLEQNQRNLEERLKNSSSF HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA