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The map label for this gene is ytqA [H]

Identifier: 118581877

GI number: 118581877

Start: 3839564

End: 3840505

Strand: Direct

Name: ytqA [H]

Synonym: Ppro_3477

Alternate gene names: 118581877

Gene position: 3839564-3840505 (Clockwise)

Preceding gene: 118581876

Following gene: 118581884

Centisome position: 95.8

GC content: 62.53

Gene sequence:

>942_bases
ATGAAACCCTTTCCTGACCATCAGATCCACCCCGACCTCCGCATCAACTCCTATGGTCACTACCTGCGCCGCCGCTTCGG
CTGTCGGGTCAGCAAGGTCAACGTGGATGGCGGCTTCACCTGCCCCAACCGCGACGGCAGCAAGGGAACCGGCGGCTGCG
TCTACTGCAACAACGTCTCCTTCTCCCCCAAGGCCACCCAGCCGGTGATCCCCATCGAGGAGCAGATGGCCCAGGGTATG
GCTTATCACCGTACCCGACTGGGATCCGAGAAGTTCATCATCTACTTCCAGAAATACACCAACACCTACGCCTCTCTGGA
TGTGCTGGCAGATTTTTACCACCGCGCCCTGGACCACCCGGACGTGCTGGGTATCTCGGTGGGCACCCGGCCCGACGCCC
TCTCCGACGAGGCGTTGGAGCTTTTGACCGAGATCGCACGCACGCGCTACGTCTGCCTGGAGCTGGGATTGCAGTCCATC
AACGACGACATCCTGGCGGACATCAACCGCGGCCATACCCTGGACGAGTACCTGGAGACGGTCCAGCGGGCAGCCGGCCG
CAACTTCGACATCTGCACCCATCTTATCTACGGATTTCCGGGAGAGACGAGGGAAGGCTTCCTGAAGAGCGCCAACCTGA
TCGCCTCACTTCCGGTGGATTCCATCAAGCTGCATCAGCTGCACGCAGTGGAGGGGACCGAGCTGGCCAGGCGCTACTTC
CGCGGCGAGTACCGTCCGCTCAAGATCGAAGAGTACATCGCCACGGCGGCCGACTTCCTGGAGCGCCTCCCCGGCCGGGT
CACGATCCAGCGCCTGTACGGCTCGGCGCCGCTGGATATCTGCGTGGCACCCCGCTGGGGGCTGAAGAACAACCAGATGT
GGTATGCGGTGGTCAACGAGTTGAAGCGGCGCGGCACCTGGCAGGGGTGTCGGAGAGCATAA

Upstream 100 bases:

>100_bases
ATGGCAGCCGGAGCCCACGGCGTCGCCCTGATCTCGGCCATCACGGCAGCCGCCAACCCCGAAACCGAGGCAGCATCCTT
ACTACAGACGATCGAGCAGC

Downstream 100 bases:

>100_bases
TCCGCTGAACTGGCAGCGGGAGAGAGGGCAACGACCGTAATTCCAATCCCAACTCCTGGCCACCCGCCTCATCAATCACT
GTTCTCGCTGAAAATCGTAT

Product: putative radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKPFPDHQIHPDLRINSYGHYLRRRFGCRVSKVNVDGGFTCPNRDGSKGTGGCVYCNNVSFSPKATQPVIPIEEQMAQGM
AYHRTRLGSEKFIIYFQKYTNTYASLDVLADFYHRALDHPDVLGISVGTRPDALSDEALELLTEIARTRYVCLELGLQSI
NDDILADINRGHTLDEYLETVQRAAGRNFDICTHLIYGFPGETREGFLKSANLIASLPVDSIKLHQLHAVEGTELARRYF
RGEYRPLKIEEYIATAADFLERLPGRVTIQRLYGSAPLDICVAPRWGLKNNQMWYAVVNELKRRGTWQGCRRA

Sequences:

>Translated_313_residues
MKPFPDHQIHPDLRINSYGHYLRRRFGCRVSKVNVDGGFTCPNRDGSKGTGGCVYCNNVSFSPKATQPVIPIEEQMAQGM
AYHRTRLGSEKFIIYFQKYTNTYASLDVLADFYHRALDHPDVLGISVGTRPDALSDEALELLTEIARTRYVCLELGLQSI
NDDILADINRGHTLDEYLETVQRAAGRNFDICTHLIYGFPGETREGFLKSANLIASLPVDSIKLHQLHAVEGTELARRYF
RGEYRPLKIEEYIATAADFLERLPGRVTIQRLYGSAPLDICVAPRWGLKNNQMWYAVVNELKRRGTWQGCRRA
>Mature_313_residues
MKPFPDHQIHPDLRINSYGHYLRRRFGCRVSKVNVDGGFTCPNRDGSKGTGGCVYCNNVSFSPKATQPVIPIEEQMAQGM
AYHRTRLGSEKFIIYFQKYTNTYASLDVLADFYHRALDHPDVLGISVGTRPDALSDEALELLTEIARTRYVCLELGLQSI
NDDILADINRGHTLDEYLETVQRAAGRNFDICTHLIYGFPGETREGFLKSANLIASLPVDSIKLHQLHAVEGTELARRYF
RGEYRPLKIEEYIATAADFLERLPGRVTIQRLYGSAPLDICVAPRWGLKNNQMWYAVVNELKRRGTWQGCRRA

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=275, Percent_Identity=39.6363636363636, Blast_Score=204, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6325171, Length=220, Percent_Identity=22.2727272727273, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35546; Mature: 35546

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFPDHQIHPDLRINSYGHYLRRRFGCRVSKVNVDGGFTCPNRDGSKGTGGCVYCNNVS
CCCCCCCCCCCCCEECHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC
FSPKATQPVIPIEEQMAQGMAYHRTRLGSEKFIIYFQKYTNTYASLDVLADFYHRALDHP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCCC
DVLGISVGTRPDALSDEALELLTEIARTRYVCLELGLQSINDDILADINRGHTLDEYLET
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH
VQRAAGRNFDICTHLIYGFPGETREGFLKSANLIASLPVDSIKLHQLHAVEGTELARRYF
HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCHHEECCCCCEEHHHEECCCHHHHHHHHH
RGEYRPLKIEEYIATAADFLERLPGRVTIQRLYGSAPLDICVAPRWGLKNNQMWYAVVNE
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH
LKRRGTWQGCRRA
HHHCCCCHHHCCC
>Mature Secondary Structure
MKPFPDHQIHPDLRINSYGHYLRRRFGCRVSKVNVDGGFTCPNRDGSKGTGGCVYCNNVS
CCCCCCCCCCCCCEECHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC
FSPKATQPVIPIEEQMAQGMAYHRTRLGSEKFIIYFQKYTNTYASLDVLADFYHRALDHP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCCC
DVLGISVGTRPDALSDEALELLTEIARTRYVCLELGLQSINDDILADINRGHTLDEYLET
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH
VQRAAGRNFDICTHLIYGFPGETREGFLKSANLIASLPVDSIKLHQLHAVEGTELARRYF
HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCHHEECCCCCEEHHHEECCCHHHHHHHHH
RGEYRPLKIEEYIATAADFLERLPGRVTIQRLYGSAPLDICVAPRWGLKNNQMWYAVVNE
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH
LKRRGTWQGCRRA
HHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]