| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is thiE [H]
Identifier: 118581876
GI number: 118581876
Start: 3838909
End: 3839580
Strand: Direct
Name: thiE [H]
Synonym: Ppro_3476
Alternate gene names: 118581876
Gene position: 3838909-3839580 (Clockwise)
Preceding gene: 118581875
Following gene: 118581877
Centisome position: 95.78
GC content: 65.48
Gene sequence:
>672_bases ATGTCGACCGTTTCCCGGGGTGAAGGACAATCCCGTTGCGTTGATTTTTCACTGTACCTGATCACCGACCGGCGTCAGAC CGCCGGTCGGCCTCTGCTGGATGTCGTAGCCGCCGCCCTCAGGGGGGGCGTCGGGGCGGTGCAACTCAGGGAGAAGGACC TGCCCGACAACGAACTATTAGAACTGGCCCGTGACCTGCGGCGCCTGACGCACGAACACCATGCCCGCCTGCTGATCAAC CGCAGGGTGGATGTCTGTCAGGCGGTGGGCGCCGACGGCGTTCAGCTGGGAATCGAAGGGCTCTCCATAGTCGAGGCGCG GCGGTTACTGGGCGATGGCCCGCTGATCGGCTATTCGGCCCATGCCGTGGAAGAGGCCCGCAGGGCAGAGGCTTCTGGCG CGGACTTCGTCACCCTCAGCCCGGTATATCACACCCCTTCCAAGGCCCCCTTCGGCGAACCGCTGGGGCCGGACAGACTG GGGGAGGCCTGCGGGGCCCTGGGCATTCCGGTATTCGCCCTGGGGGGCATCAAAGGAAGCACCATCGCCCGGGTCATGGC AGCCGGAGCCCACGGCGTCGCCCTGATCTCGGCCATCACGGCAGCCGCCAACCCCGAAACCGAGGCAGCATCCTTACTAC AGACGATCGAGCAGCATGAAACCCTTTCCTGA
Upstream 100 bases:
>100_bases ATCTGGCGGTGAGGGCCGGCCGCCTCTCCTACAAGGCAGGCCGCATCCCGCGCAAGCTCTACGCCAACGCCTCCAGCCCG CTGGATGGGATGATCGGCTG
Downstream 100 bases:
>100_bases CCATCAGATCCACCCCGACCTCCGCATCAACTCCTATGGTCACTACCTGCGCCGCCGCTTCGGCTGTCGGGTCAGCAAGG TCAACGTGGATGGCGGCTTC
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSTVSRGEGQSRCVDFSLYLITDRRQTAGRPLLDVVAAALRGGVGAVQLREKDLPDNELLELARDLRRLTHEHHARLLIN RRVDVCQAVGADGVQLGIEGLSIVEARRLLGDGPLIGYSAHAVEEARRAEASGADFVTLSPVYHTPSKAPFGEPLGPDRL GEACGALGIPVFALGGIKGSTIARVMAAGAHGVALISAITAAANPETEAASLLQTIEQHETLS
Sequences:
>Translated_223_residues MSTVSRGEGQSRCVDFSLYLITDRRQTAGRPLLDVVAAALRGGVGAVQLREKDLPDNELLELARDLRRLTHEHHARLLIN RRVDVCQAVGADGVQLGIEGLSIVEARRLLGDGPLIGYSAHAVEEARRAEASGADFVTLSPVYHTPSKAPFGEPLGPDRL GEACGALGIPVFALGGIKGSTIARVMAAGAHGVALISAITAAANPETEAASLLQTIEQHETLS >Mature_222_residues STVSRGEGQSRCVDFSLYLITDRRQTAGRPLLDVVAAALRGGVGAVQLREKDLPDNELLELARDLRRLTHEHHARLLINR RVDVCQAVGADGVQLGIEGLSIVEARRLLGDGPLIGYSAHAVEEARRAEASGADFVTLSPVYHTPSKAPFGEPLGPDRLG EACGALGIPVFALGGIKGSTIARVMAAGAHGVALISAITAAANPETEAASLLQTIEQHETLS
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=198, Percent_Identity=31.8181818181818, Blast_Score=62, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6325042, Length=224, Percent_Identity=32.5892857142857, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23438; Mature: 23307
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVSRGEGQSRCVDFSLYLITDRRQTAGRPLLDVVAAALRGGVGAVQLREKDLPDNELL CCCCCCCCCCCEEEEEEEEEEECCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHH ELARDLRRLTHEHHARLLINRRVDVCQAVGADGVQLGIEGLSIVEARRLLGDGPLIGYSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEECCHH HAVEEARRAEASGADFVTLSPVYHTPSKAPFGEPLGPDRLGEACGALGIPVFALGGIKGS HHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHH TIARVMAAGAHGVALISAITAAANPETEAASLLQTIEQHETLS HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure STVSRGEGQSRCVDFSLYLITDRRQTAGRPLLDVVAAALRGGVGAVQLREKDLPDNELL CCCCCCCCCCEEEEEEEEEEECCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHH ELARDLRRLTHEHHARLLINRRVDVCQAVGADGVQLGIEGLSIVEARRLLGDGPLIGYSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEECCHH HAVEEARRAEASGADFVTLSPVYHTPSKAPFGEPLGPDRLGEACGALGIPVFALGGIKGS HHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHH TIARVMAAGAHGVALISAITAAANPETEAASLLQTIEQHETLS HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA