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The map label for this gene is flhF [H]

Identifier: 118581845

GI number: 118581845

Start: 3805286

End: 3806626

Strand: Direct

Name: flhF [H]

Synonym: Ppro_3445

Alternate gene names: 118581845

Gene position: 3805286-3806626 (Clockwise)

Preceding gene: 118581844

Following gene: 118581846

Centisome position: 94.94

GC content: 53.69

Gene sequence:

>1341_bases
ATGCTGGTTAAGACCTTTCAAGCTCCAAGCATGGCAGAGGCTCTGCGTAAGGTTAAGGCGGAACTTGGCTCCGATGCCAT
GATTCTTTCGACCAAACAGGAAAAGACCGGCGGTTTTTTAGGTTTTTTCCGCAAAAACGTCTACAAGGTGACTGCGGCCG
TCGACCCGGCCCACAAAGCCGCTCCGCTCGCCCCGCCTGCGATGTCCGCCGCCTTTCGCGAGCAACCGCAGAGGCAGCGG
ACTGCCAAGGAAGATCTGGAAAATTCGATGCTTGCTCCACTGGCCCGCGAGCTGAGGGAGCTGCGCGAAAAAGTAGAAGT
ACTGTCTCGGGGCAAGGAAACGACAAAGAACGAGGAACCAGCGGAGACTGTTTCCCAACCGGACTCCCTCGAAAGTGGCT
TAAACATTCAGAATATTCCGCGGGGCGATCTGGAGGAGATCAAGAAGCTGTTACTCAACACCCTTGCCAGGAACCAGGAA
GGGGACGTCAAGACGGTTCAGTGGCCTGCCGTGCCGGATGGAGCCGGGACGGAAAAACCGTCCGGCACTGACTCTTCAAC
CAATGCCTCTCCACTGGCCCAGGAGTTGAGCCGGAGCGGCATATCCAGTGATCTGGTTGAGACGATCCTTGACGCCCTCG
ACAAACTACCAAGTGGGGGAGGAAATCAGGCGCTCAAGAGCCGCCTTAGTGAGGTGTTCGGGCGCTTGATTCGCTTTGCC
GGCACCCTGAAGGTACGCAAGAACGCTCCCCGTATCATCGCACTGGTGGGTCCCACCGGAGTGGGCAAGACCACCACAAC
CGCAAAACTTGCCGCCATGCATGCATTCAATCGTGGCAACAAGGTTGCGTTGATTACGATGGATATTTTCAGGGTCGGAG
CTATTGAGCAACTGAAGACCTATTCACGCATCATGGGCATTCCCATAGAAGTGGCTTCTACGCCAAAAGAACTTGAAAGT
GCGGTGGAGAAGCATGCCGACTGCGACCTGATATTTATCGATACGGCGGGGAGAAGCCACAAGGACACGGAAAAGCTGAA
CGAGATGAAACAGTTTTTCGCGGACAAGATCCCGATGGAAGTTTTCCTCTGCCTGTCGGCTACGACCAAGGATCGGGAGC
TGACTGAAATTCTGAACTGTTTCAGCATTTTTCAAATCAGCAAGGTCGTATTCACTAAAATCGATGAGAGCGAGAGCTTT
GGCAACATGATCAATGTGCTGATGAAAGGCAATCTGCAGGTAGCTTATTTCACGACAGGACAACGGGTTCCTGAAGACAT
AGAAGTGGCAACTCCATCCAAGCTGGCTGACATGATCCTGAGAGGGGCGACAAATGAGTGA

Upstream 100 bases:

>100_bases
AGAAAACTGATCGAACGCTTTGTCCCACACATGGCGGTTCTCTCCCACAACGAGATTCCACAGAATATAAAAATTCAATC
ACTAGGGGTGGTAACCATAA

Downstream 100 bases:

>100_bases
GGTCACCGTAAAAGGCGATCAGGCTGAAACCTTGCGGGAGATGGCGCGGTCGGCCACCAAAGTCCAAGGGGTTGATTCCT
CTCAGGGACCGTCAGTTGCC

Product: GTP-binding signal recognition particle

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLVKTFQAPSMAEALRKVKAELGSDAMILSTKQEKTGGFLGFFRKNVYKVTAAVDPAHKAAPLAPPAMSAAFREQPQRQR
TAKEDLENSMLAPLARELRELREKVEVLSRGKETTKNEEPAETVSQPDSLESGLNIQNIPRGDLEEIKKLLLNTLARNQE
GDVKTVQWPAVPDGAGTEKPSGTDSSTNASPLAQELSRSGISSDLVETILDALDKLPSGGGNQALKSRLSEVFGRLIRFA
GTLKVRKNAPRIIALVGPTGVGKTTTTAKLAAMHAFNRGNKVALITMDIFRVGAIEQLKTYSRIMGIPIEVASTPKELES
AVEKHADCDLIFIDTAGRSHKDTEKLNEMKQFFADKIPMEVFLCLSATTKDRELTEILNCFSIFQISKVVFTKIDESESF
GNMINVLMKGNLQVAYFTTGQRVPEDIEVATPSKLADMILRGATNE

Sequences:

>Translated_446_residues
MLVKTFQAPSMAEALRKVKAELGSDAMILSTKQEKTGGFLGFFRKNVYKVTAAVDPAHKAAPLAPPAMSAAFREQPQRQR
TAKEDLENSMLAPLARELRELREKVEVLSRGKETTKNEEPAETVSQPDSLESGLNIQNIPRGDLEEIKKLLLNTLARNQE
GDVKTVQWPAVPDGAGTEKPSGTDSSTNASPLAQELSRSGISSDLVETILDALDKLPSGGGNQALKSRLSEVFGRLIRFA
GTLKVRKNAPRIIALVGPTGVGKTTTTAKLAAMHAFNRGNKVALITMDIFRVGAIEQLKTYSRIMGIPIEVASTPKELES
AVEKHADCDLIFIDTAGRSHKDTEKLNEMKQFFADKIPMEVFLCLSATTKDRELTEILNCFSIFQISKVVFTKIDESESF
GNMINVLMKGNLQVAYFTTGQRVPEDIEVATPSKLADMILRGATNE
>Mature_446_residues
MLVKTFQAPSMAEALRKVKAELGSDAMILSTKQEKTGGFLGFFRKNVYKVTAAVDPAHKAAPLAPPAMSAAFREQPQRQR
TAKEDLENSMLAPLARELRELREKVEVLSRGKETTKNEEPAETVSQPDSLESGLNIQNIPRGDLEEIKKLLLNTLARNQE
GDVKTVQWPAVPDGAGTEKPSGTDSSTNASPLAQELSRSGISSDLVETILDALDKLPSGGGNQALKSRLSEVFGRLIRFA
GTLKVRKNAPRIIALVGPTGVGKTTTTAKLAAMHAFNRGNKVALITMDIFRVGAIEQLKTYSRIMGIPIEVASTPKELES
AVEKHADCDLIFIDTAGRSHKDTEKLNEMKQFFADKIPMEVFLCLSATTKDRELTEILNCFSIFQISKVVFTKIDESESF
GNMINVLMKGNLQVAYFTTGQRVPEDIEVATPSKLADMILRGATNE

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1788963, Length=205, Percent_Identity=27.3170731707317, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789874, Length=230, Percent_Identity=28.2608695652174, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325345, Length=203, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 48735; Mature: 48735

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKTFQAPSMAEALRKVKAELGSDAMILSTKQEKTGGFLGFFRKNVYKVTAAVDPAHKA
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHCCCHHHHHHHHHEEEEEECCCHHHC
APLAPPAMSAAFREQPQRQRTAKEDLENSMLAPLARELRELREKVEVLSRGKETTKNEEP
CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AETVSQPDSLESGLNIQNIPRGDLEEIKKLLLNTLARNQEGDVKTVQWPAVPDGAGTEKP
HHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
SGTDSSTNASPLAQELSRSGISSDLVETILDALDKLPSGGGNQALKSRLSEVFGRLIRFA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GTLKVRKNAPRIIALVGPTGVGKTTTTAKLAAMHAFNRGNKVALITMDIFRVGAIEQLKT
HHHEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
YSRIMGIPIEVASTPKELESAVEKHADCDLIFIDTAGRSHKDTEKLNEMKQFFADKIPME
HHHHHCCCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHH
VFLCLSATTKDRELTEILNCFSIFQISKVVFTKIDESESFGNMINVLMKGNLQVAYFTTG
HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECC
QRVPEDIEVATPSKLADMILRGATNE
CCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLVKTFQAPSMAEALRKVKAELGSDAMILSTKQEKTGGFLGFFRKNVYKVTAAVDPAHKA
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHCCCHHHHHHHHHEEEEEECCCHHHC
APLAPPAMSAAFREQPQRQRTAKEDLENSMLAPLARELRELREKVEVLSRGKETTKNEEP
CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AETVSQPDSLESGLNIQNIPRGDLEEIKKLLLNTLARNQEGDVKTVQWPAVPDGAGTEKP
HHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
SGTDSSTNASPLAQELSRSGISSDLVETILDALDKLPSGGGNQALKSRLSEVFGRLIRFA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GTLKVRKNAPRIIALVGPTGVGKTTTTAKLAAMHAFNRGNKVALITMDIFRVGAIEQLKT
HHHEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
YSRIMGIPIEVASTPKELESAVEKHADCDLIFIDTAGRSHKDTEKLNEMKQFFADKIPME
HHHHHCCCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHH
VFLCLSATTKDRELTEILNCFSIFQISKVVFTKIDESESFGNMINVLMKGNLQVAYFTTG
HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECC
QRVPEDIEVATPSKLADMILRGATNE
CCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]