| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is epsE [H]
Identifier: 118581793
GI number: 118581793
Start: 3744631
End: 3745557
Strand: Reverse
Name: epsE [H]
Synonym: Ppro_3393
Alternate gene names: 118581793
Gene position: 3745557-3744631 (Counterclockwise)
Preceding gene: 118581794
Following gene: 118581792
Centisome position: 93.45
GC content: 47.36
Gene sequence:
>927_bases ATGAAGATCAGCGTAATAATGTCTGCCTACAACGCAGAAAAGCACCTGACGAAATCCATTGAGTCGGTGCTGGGGCAGAC CTACAGCGACTTTGAATTCCTCATTGTCAATGACGCATCGACCGATGACACTCCGGCCCTTTTGCAGAAATACCAGAGAT CGGATAATCGCATCGCACTACTGCATAACCGGTCAAACATTGGATTGACGCGTTCACTGAATCTTGCCATACAGCATGCA CGGCATAACATCATAGCTCGACAGGACGCTGATGATATTTCTCATCCTGAGCGGTTTTCCAAGCAAATTGACTTCTTGAA GACACATGGCGAAGTAATGCTACTTGGGACCGCAGGGCAGTTAATTGATGATTCGGGCCGGATTCTAAGGAATGAACCGG TGATATCCGGAAGTGTGCGACTCAAGAAGCGTCTGCAGAGATGTAACCAGTTTATCCACGGGTCAGTAATGATGCGGCGG CAATGCCTCAACGTCATTGGCCTTTATAGAGAGGAATTTGTAAGCGCCCAAGACTACGACCTCTTTCTACGGATTTCAGA ACAGTACGCGGTAGACAATCTTCCTGTTCCTCTCTATCAGTATCGGATCAGCCCTTCAACAGTCTCCATAGCCAAAAGCA GGCAGCAGCAGGTTTGTGCTCTGATTGCCCAGGAGGCCTCAAGGGACCGGCGCTCCGGCATGCCAAACAACTGGGACCAG CTCATGTACGATGCCTATAGTCGTAGAATCAATTCAAAGCGTTTTCATAAAACGATTGAATGCAATCTCGCATTAACAAA GGGAAGAAACAGTTTACTCGCTGGCGAGCATTTAACGGCAAAAAAAGAATTCAGCAAAGCTTTTGTGGTCAGACCGTCTC TAAAAACACTCTACCATTTAGTCCGTAGTTATGTCTGCTGCCGATAA
Upstream 100 bases:
>100_bases TCACCAATGAAACAGTAAGCTGCCTGATTTTTGCCAGTCTAATTTGCTGGAAACATCTGCTGCCTGACTCAGTTCAGCAG CCACTGGATACTACAAGAGC
Downstream 100 bases:
>100_bases CCCAAAAGCAAGCATCATAATTTGTACAGTTGACAGGCCCCAGCAACTGGCAGCTTGTGTCGCGGCATTACTGCAACAGC AGGGCGCATTTGAAATAATT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIALLHNRSNIGLTRSLNLAIQHA RHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQLIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRR QCLNVIGLYREEFVSAQDYDLFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHLVRSYVCCR
Sequences:
>Translated_308_residues MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIALLHNRSNIGLTRSLNLAIQHA RHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQLIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRR QCLNVIGLYREEFVSAQDYDLFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHLVRSYVCCR >Mature_308_residues MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIALLHNRSNIGLTRSLNLAIQHA RHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQLIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRR QCLNVIGLYREEFVSAQDYDLFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHLVRSYVCCR
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 35336; Mature: 35336
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIAL CEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEE LHNRSNIGLTRSLNLAIQHARHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQ EECCCCCCEEEHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC LIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRRQCLNVIGLYREEFVSAQDYD EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ EEEEEECHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHL HHHHHHHHHCCHHHHHEEEEEEEEEECCCCCEECCCCHHHHHHHHHHEEECCCHHHHHHH VRSYVCCR HHHHHCCC >Mature Secondary Structure MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIAL CEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEE LHNRSNIGLTRSLNLAIQHARHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQ EECCCCCCEEEHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC LIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRRQCLNVIGLYREEFVSAQDYD EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ EEEEEECHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHL HHHHHHHHHCCHHHHHEEEEEEEEEECCCCCEECCCCHHHHHHHHHHEEECCCHHHHHHH VRSYVCCR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]