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The map label for this gene is yiiX [H]

Identifier: 118581768

GI number: 118581768

Start: 3718831

End: 3719451

Strand: Direct

Name: yiiX [H]

Synonym: Ppro_3368

Alternate gene names: 118581768

Gene position: 3718831-3719451 (Clockwise)

Preceding gene: 118581767

Following gene: 118581769

Centisome position: 92.79

GC content: 60.71

Gene sequence:

>621_bases
ATGTCTCTCCCTCTGATACGCCGCCTGCTGATCCTGCTTTCCCTGTTCTGCCTTACCGGTTTGCCGGTCAACGCCGCCGA
CCTGAGGGACGGCGACATCATCTTCCAGGTCTCCCGTTCCCCCCAGAGCAAGGCGATCCAGAAGGCTACCGGCTCCCGCT
ACAGCCACATGGGGATCATCATCCACCGCAGCGGCTTTCCCCAGGTGTTCGAGGCTGCCGCCAAGGTGCGCTACACCCCC
CTGAGCGACTGGATACGACGCGGCGTCCACGGCAAGTACGTTGTCAAACGGCTGCGCAATGCCGATTACCTGCTCAACGG
TGAGACGCTCAGCAAGCTGCGCAGGGTGGCGGAAGAGCTGCGCGGCAAACCCTACGACCCTTGCTTCGAGTGGTCCGACA
CGCGCATCTACTGCTCGGAGCTGGTCTGGAAGATCTACAAGAGAACCCTGGAGATGGAGGTCGGACGGCCGCAGAAGCTG
GGGGATCTCAATCTATCCGCCCCAATTGTCAGGAAAGCGCTGCAGAAGAGGTACGGCAGGAGGATCCCGCTGGGCGAAAA
GGTCATCTCACCAGCGGCAATGTTCAACTCGAAAGAGCTGGTGACGGTGGAGAAAGAGTAG

Upstream 100 bases:

>100_bases
GCAGATCCGGGCCGGCCTGTTGTCCCGTGGCCGACTTCCGGCTCACAACCGGTATGATTTCACCCGTGCGATATTACGCC
TGCCCGAGGAGCACGTCGCC

Downstream 100 bases:

>100_bases
AGGGCGGCGCTGGATGGGCACACATGACAAATCGCAGGCCATCAGTTTGAAGCGCCGAATCAACTCCGTGGTCAGCGCCA
GGTGGTTCGCAATTGCCGGC

Product: putative peptidoglycan peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSLPLIRRLLILLSLFCLTGLPVNAADLRDGDIIFQVSRSPQSKAIQKATGSRYSHMGIIIHRSGFPQVFEAAAKVRYTP
LSDWIRRGVHGKYVVKRLRNADYLLNGETLSKLRRVAEELRGKPYDPCFEWSDTRIYCSELVWKIYKRTLEMEVGRPQKL
GDLNLSAPIVRKALQKRYGRRIPLGEKVISPAAMFNSKELVTVEKE

Sequences:

>Translated_206_residues
MSLPLIRRLLILLSLFCLTGLPVNAADLRDGDIIFQVSRSPQSKAIQKATGSRYSHMGIIIHRSGFPQVFEAAAKVRYTP
LSDWIRRGVHGKYVVKRLRNADYLLNGETLSKLRRVAEELRGKPYDPCFEWSDTRIYCSELVWKIYKRTLEMEVGRPQKL
GDLNLSAPIVRKALQKRYGRRIPLGEKVISPAAMFNSKELVTVEKE
>Mature_205_residues
SLPLIRRLLILLSLFCLTGLPVNAADLRDGDIIFQVSRSPQSKAIQKATGSRYSHMGIIIHRSGFPQVFEAAAKVRYTPL
SDWIRRGVHGKYVVKRLRNADYLLNGETLSKLRRVAEELRGKPYDPCFEWSDTRIYCSELVWKIYKRTLEMEVGRPQKLG
DLNLSAPIVRKALQKRYGRRIPLGEKVISPAAMFNSKELVTVEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yebB [H]

Homologues:

Organism=Escherichia coli, GI1790372, Length=185, Percent_Identity=51.3513513513513, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI87081991, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23572; Mature: 23441

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPLIRRLLILLSLFCLTGLPVNAADLRDGDIIFQVSRSPQSKAIQKATGSRYSHMGII
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEE
IHRSGFPQVFEAAAKVRYTPLSDWIRRGVHGKYVVKRLRNADYLLNGETLSKLRRVAEEL
EECCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHH
RGKPYDPCFEWSDTRIYCSELVWKIYKRTLEMEVGRPQKLGDLNLSAPIVRKALQKRYGR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
RIPLGEKVISPAAMFNSKELVTVEKE
CCCCCHHHHCHHHHCCCCCEEEEECC
>Mature Secondary Structure 
SLPLIRRLLILLSLFCLTGLPVNAADLRDGDIIFQVSRSPQSKAIQKATGSRYSHMGII
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEE
IHRSGFPQVFEAAAKVRYTPLSDWIRRGVHGKYVVKRLRNADYLLNGETLSKLRRVAEEL
EECCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHH
RGKPYDPCFEWSDTRIYCSELVWKIYKRTLEMEVGRPQKLGDLNLSAPIVRKALQKRYGR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
RIPLGEKVISPAAMFNSKELVTVEKE
CCCCCHHHHCHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 7868617 [H]