| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is mtnU [H]
Identifier: 118581727
GI number: 118581727
Start: 3663853
End: 3664623
Strand: Reverse
Name: mtnU [H]
Synonym: Ppro_3327
Alternate gene names: 118581727
Gene position: 3664623-3663853 (Counterclockwise)
Preceding gene: 118581728
Following gene: 118581726
Centisome position: 91.43
GC content: 58.63
Gene sequence:
>771_bases ATGATAACCGCTGCCGCCATCCAGTTTACTATCAAGCCTGGCAATGTGGATGCAAACCTCGCCCATGCGCGGGACGCCCT CGGGCGCGCCTCCGACCGGGGGGCTCAACTGGTCGTGCTGCCCGAAATGTGGTCCTGCGGTTTTTGCGGCAAAAGCCTGG CTGGTCTTGCCATGCATACCGCGGCTATTGCCGAGGAATTGCAGGATCTTTCCCGCAGGCTGGGTTTAGTGGTTGTGGGA AGCATGCCCGAACCAAACGGGGACAGGGTGTTCAACACAATCCATCTGATCGACAACGGCAGGCTTGCAGGAATCTACCG CAAGGTCCACCTGTTTTCCCTGCTGGGGGAAGATCGCGTTTTTGCCGCTGGAGACGGCTGTCTGCTGGCGGATACATCGA TCGGGAAAATCGGTGTCATCATCTGCTATGACCTGCGTTTTCCCGAGTTGTCACGACGTCTTGCCCTCGAGGGCGCTCAG ATCCTCTGCATCCCGGCCCAATGGCCCAAGCCACGAAACGAACAGTGGCGAACACTGCTGCAGGCCCGGGCCATAGAGAA CCAGTTCTTCGTTGTTGCATCCAACACCTGCGGCATGGTGGGCAAACTGGATTTCTTCGGCATGAGCATGATAATCGGCC CCCGGGGGGACGTGCTTGCGGAGGCGGGAGATCGGGAAACGGAGATCGTTGCCGGCCTTGATATGCGGGATATGGCCGAG TGGCGTGCTCAAATCCCCTGCTTCAAAGATCGCAGGCCGGAATTGTACTGA
Upstream 100 bases:
>100_bases CAGGGCTCTTTTGCGTATGCATCCTGACGGCATGCGGCTACGGCGCTGTGTTCTCTCCCGTGGCGTGCCCCAAAAACAGG ACCAGAAAGGAAGCTCCAGA
Downstream 100 bases:
>100_bases TTTTGACTTGACTTGATTATCCGTTCGGACTAGCTTTCCCACATATTTCATCCTCCGGAGGTGCTCGTTGTGGCCCTGCT GCTTAACGCCGGTATCGTCG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MITAAAIQFTIKPGNVDANLAHARDALGRASDRGAQLVVLPEMWSCGFCGKSLAGLAMHTAAIAEELQDLSRRLGLVVVG SMPEPNGDRVFNTIHLIDNGRLAGIYRKVHLFSLLGEDRVFAAGDGCLLADTSIGKIGVIICYDLRFPELSRRLALEGAQ ILCIPAQWPKPRNEQWRTLLQARAIENQFFVVASNTCGMVGKLDFFGMSMIIGPRGDVLAEAGDRETEIVAGLDMRDMAE WRAQIPCFKDRRPELY
Sequences:
>Translated_256_residues MITAAAIQFTIKPGNVDANLAHARDALGRASDRGAQLVVLPEMWSCGFCGKSLAGLAMHTAAIAEELQDLSRRLGLVVVG SMPEPNGDRVFNTIHLIDNGRLAGIYRKVHLFSLLGEDRVFAAGDGCLLADTSIGKIGVIICYDLRFPELSRRLALEGAQ ILCIPAQWPKPRNEQWRTLLQARAIENQFFVVASNTCGMVGKLDFFGMSMIIGPRGDVLAEAGDRETEIVAGLDMRDMAE WRAQIPCFKDRRPELY >Mature_256_residues MITAAAIQFTIKPGNVDANLAHARDALGRASDRGAQLVVLPEMWSCGFCGKSLAGLAMHTAAIAEELQDLSRRLGLVVVG SMPEPNGDRVFNTIHLIDNGRLAGIYRKVHLFSLLGEDRVFAAGDGCLLADTSIGKIGVIICYDLRFPELSRRLALEGAQ ILCIPAQWPKPRNEQWRTLLQARAIENQFFVVASNTCGMVGKLDFFGMSMIIGPRGDVLAEAGDRETEIVAGLDMRDMAE WRAQIPCFKDRRPELY
Specific function: May be involved in a regulatory step in the methylthioribose (MTR) recycling pathway [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=265, Percent_Identity=30.188679245283, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI297632350, Length=274, Percent_Identity=31.7518248175182, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI5031947, Length=274, Percent_Identity=31.7518248175182, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI297632348, Length=274, Percent_Identity=31.7518248175182, Blast_Score=105, Evalue=3e-23, Organism=Escherichia coli, GI1786412, Length=219, Percent_Identity=31.0502283105023, Blast_Score=109, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17556280, Length=260, Percent_Identity=33.0769230769231, Blast_Score=113, Evalue=9e-26, Organism=Saccharomyces cerevisiae, GI6323383, Length=275, Percent_Identity=30.1818181818182, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322335, Length=291, Percent_Identity=27.4914089347079, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI17933642, Length=255, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI21355835, Length=254, Percent_Identity=27.9527559055118, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 3.5.-.- [C]
Molecular weight: Translated: 28086; Mature: 28086
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITAAAIQFTIKPGNVDANLAHARDALGRASDRGAQLVVLPEMWSCGFCGKSLAGLAMHT CEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH AAIAEELQDLSRRLGLVVVGSMPEPNGDRVFNTIHLIDNGRLAGIYRKVHLFSLLGEDRV HHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEECCEEEHHHHHHHHHHHHCCCCE FAAGDGCLLADTSIGKIGVIICYDLRFPELSRRLALEGAQILCIPAQWPKPRNEQWRTLL EEECCCEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH QARAIENQFFVVASNTCGMVGKLDFFGMSMIIGPRGDVLAEAGDRETEIVAGLDMRDMAE HHHHCCCEEEEEECCCCCCEECHHHHCEEEEECCCCCEEECCCCCCEEEEECCCHHHHHH WRAQIPCFKDRRPELY HHHCCCCCCCCCCCCC >Mature Secondary Structure MITAAAIQFTIKPGNVDANLAHARDALGRASDRGAQLVVLPEMWSCGFCGKSLAGLAMHT CEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH AAIAEELQDLSRRLGLVVVGSMPEPNGDRVFNTIHLIDNGRLAGIYRKVHLFSLLGEDRV HHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEECCEEEHHHHHHHHHHHHCCCCE FAAGDGCLLADTSIGKIGVIICYDLRFPELSRRLALEGAQILCIPAQWPKPRNEQWRTLL EEECCCEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH QARAIENQFFVVASNTCGMVGKLDFFGMSMIIGPRGDVLAEAGDRETEIVAGLDMRDMAE HHHHCCCEEEEEECCCCCCEECHHHHCEEEEECCCCCEEECCCCCCEEEEECCCHHHHHH WRAQIPCFKDRRPELY HHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 12022921 [H]