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The map label for this gene is rpe [H]

Identifier: 118581642

GI number: 118581642

Start: 3560831

End: 3561496

Strand: Reverse

Name: rpe [H]

Synonym: Ppro_3241

Alternate gene names: 118581642

Gene position: 3561496-3560831 (Counterclockwise)

Preceding gene: 118581643

Following gene: 118581641

Centisome position: 88.86

GC content: 63.51

Gene sequence:

>666_bases
ATGAAGAAGATAGCCCCTTCGATCCTCTCCGCCGATTTTTCCCGGCTGGGCGAAGAGATCCGCAGCCTGGAGGCAGCAGG
CGCCGACTATGTCCATGTGGACGTCATGGACGGCCATTTCGTTCCCAATATCACCATCGGCCCGCTGGTGGTGGAGGCTG
CCCGCCGGGTGACCGACCTGCCGCTGGACGTGCATCTGATGATCGAGAACCCCGATCGCTACATCCCGGACTTTGCCGCC
GCGGGCGCCGATATCATCGTGGTGCACGCCGAGGCGGTATACCATCTGCACCGCACCGTGCAGCTGATCAGATCCCTGGG
CAAGCGTCCCGGCGTTGCCCTCAATCCGGCCACGCCGCTGCAGTGCCTCGAGTATGTGCTGGACGACCTTGATCTGGTAC
TGCTGATGACGGTTAACCCCGGTTTCGGCGGACAGAGCTTCATCGACGGCTGCCTGCCCAAGATCCACGCCCTGCGGGCC
ATGCTGGACCGCCGCGGTTGCGAGGCTGAATTGGAGGTGGACGGCGGGGTCAAGATCTCCAACATCGCCCAGGTGTCCCA
TGCCGGCGCGGACGTGTTCGTGGCCGGCAGTGCGGTCTTCGGCAGCCAGGACTACGGTGCTACCATTGCCGAGATGAAGC
GTCTGGCCCGGGAACCGCTTTTGTAA

Upstream 100 bases:

>100_bases
TGCGTTCCTGGCCCCATTGTCATGGCATGGACGGCTTCTTCGCCGCCAGGCTCATCAAGCGCTAAGTACCACCAACTACA
CATCAGGGAGTATTGCACCC

Downstream 100 bases:

>100_bases
ATTGTTTTCTGCGACGACGGGTTGCGCCGTCTCGATACCGGCTCTCCAGGGGGTGTTCCCGGCGTTGGGGCTGATTTTGA
AATTGTGTTTGGCGGTGAAT

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKKIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDLPLDVHLMIENPDRYIPDFAA
AGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPLQCLEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRA
MLDRRGCEAELEVDGGVKISNIAQVSHAGADVFVAGSAVFGSQDYGATIAEMKRLAREPLL

Sequences:

>Translated_221_residues
MKKIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDLPLDVHLMIENPDRYIPDFAA
AGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPLQCLEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRA
MLDRRGCEAELEVDGGVKISNIAQVSHAGADVFVAGSAVFGSQDYGATIAEMKRLAREPLL
>Mature_221_residues
MKKIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDLPLDVHLMIENPDRYIPDFAA
AGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPLQCLEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRA
MLDRRGCEAELEVDGGVKISNIAQVSHAGADVFVAGSAVFGSQDYGATIAEMKRLAREPLL

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=218, Percent_Identity=39.4495412844037, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI219879828, Length=218, Percent_Identity=37.6146788990826, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI24307923, Length=173, Percent_Identity=30.0578034682081, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1789788, Length=211, Percent_Identity=57.345971563981, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI1790523, Length=220, Percent_Identity=38.6363636363636, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI1790754, Length=210, Percent_Identity=36.1904761904762, Blast_Score=122, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17552948, Length=216, Percent_Identity=37.037037037037, Blast_Score=150, Evalue=7e-37,
Organism=Saccharomyces cerevisiae, GI6322341, Length=224, Percent_Identity=41.5178571428571, Blast_Score=174, Evalue=8e-45,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=41.0377358490566, Blast_Score=164, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23800; Mature: 23800

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PLDVHLMIENPDRYIPDFAAAGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPL
CCEEEEEEECCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCHH
QCLEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRAMLDRRGCEAELEVDGGVKIS
HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEH
NIAQVSHAGADVFVAGSAVFGSQDYGATIAEMKRLAREPLL
HHHHHHHCCCCEEEECCEEECCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PLDVHLMIENPDRYIPDFAAAGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPL
CCEEEEEEECCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCCHH
QCLEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRAMLDRRGCEAELEVDGGVKIS
HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEH
NIAQVSHAGADVFVAGSAVFGSQDYGATIAEMKRLAREPLL
HHHHHHHCCCCEEEECCEEECCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]