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The map label for this gene is ynhG [H]

Identifier: 118581595

GI number: 118581595

Start: 3509346

End: 3510386

Strand: Direct

Name: ynhG [H]

Synonym: Ppro_3194

Alternate gene names: 118581595

Gene position: 3509346-3510386 (Clockwise)

Preceding gene: 118581567

Following gene: 118581604

Centisome position: 87.56

GC content: 59.65

Gene sequence:

>1041_bases
ATGGCAGAGCGCTACTATCTGCTCTGCATCCAGAAGAGCCGAGTTCTGTTCTCTTCCCTGGCAGAGCGGGGACAGAAGAA
CGCCCCTTTACCCCCGCCTGACCAACCTCCCGCCCAGGCAGACGACAAGCAGCTTTCTTCTCCAGAGCCCACCGGTCAAG
CCGCCGCTGAAGCAGATGCGAACAGGCCGGCGGAAAACGATTTCATCCCGGACAGCACCGTATCCAAACACCTCGTCGGC
CGCACGTCACTCTACACCGTCAGGAAGCACGATACGCTCAGGCTGATCTCCTCCAAACTGGGCGTGAGCCAGCAGCACCT
GATCAGGATGAACAGGCTTGCGTCGGCAACGACAGTCAAACCTGGGCAAAAGTTGAAATACAACAACCGCAAGATCATTC
CCCGCCGCATGTCCCATGGCATTGTCATCAATATCCCCGATCGCACCCTGTACTACTTCAAGGAGGGGAAGCTGACCACG
TCCCTCCCCGTTGCGCTCGGGCAGCCCCAGAAGGGAGCAACCTACGACTGGATGACGCCCACCGGAAAATTCAGGGTCGT
GGCCAAGCAAACGGATCCCACCTGGTACGTACCGCGCTCGATCCGCTCGGAGATGGAGGCCAGGGGAAAGGACGTAAAAA
CCGTCGTCCCCCCCGGCCCCCGCAACCCGCTGGGAAAATACGCCATAAAAACCTCCCTGCCCGGCATCCTGATTCACAGC
ACCACCAGGCCGGGCTCGATCTACCGCTTTGCCAGCCACGGCTGCATCAGGGTTTATCCGGAGCAGATGAAGGATTTTTT
CAACGAGGTCAGGGTGAATACGCCGGGCGAGATCATCTACCAGCCGGTCAAGCTGGCGGTCACCGAAGAGGGGCGAGTGT
TTCTGGAGGTGCACCACGATGCCTACGGCAGGGGGGTGGAGTTGCATGCGTTGGCACGGCAACTGATCGAGCGACGGAAT
ATCGCCGACCTAGTGGACTGGAACAAGGTGGAATCGGTGGTCAAGCGCAGGGAGGGACTGGCCGAGGATGTGAGCCTCTG
A

Upstream 100 bases:

>100_bases
GCAGCGGGCCGCCATTTCCCCGGAACGATCCGGAGAACTCGCCAGCATCACGGAGTCATTCACAACTGCCGAGGAGTATC
AGCAGAGCAATAACCGCGAC

Downstream 100 bases:

>100_bases
GACGCGGCCGCGCACCGACCGGTATGCCACGAACAGAAACGGGCGCCCTTTCGTGGGCGCCCGTTTTGCTTTCTTACTCC
GGATCCAGACAGAGGGGACG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAERYYLLCIQKSRVLFSSLAERGQKNAPLPPPDQPPAQADDKQLSSPEPTGQAAAEADANRPAENDFIPDSTVSKHLVG
RTSLYTVRKHDTLRLISSKLGVSQQHLIRMNRLASATTVKPGQKLKYNNRKIIPRRMSHGIVINIPDRTLYYFKEGKLTT
SLPVALGQPQKGATYDWMTPTGKFRVVAKQTDPTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHS
TTRPGSIYRFASHGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVKLAVTEEGRVFLEVHHDAYGRGVELHALARQLIERRN
IADLVDWNKVESVVKRREGLAEDVSL

Sequences:

>Translated_346_residues
MAERYYLLCIQKSRVLFSSLAERGQKNAPLPPPDQPPAQADDKQLSSPEPTGQAAAEADANRPAENDFIPDSTVSKHLVG
RTSLYTVRKHDTLRLISSKLGVSQQHLIRMNRLASATTVKPGQKLKYNNRKIIPRRMSHGIVINIPDRTLYYFKEGKLTT
SLPVALGQPQKGATYDWMTPTGKFRVVAKQTDPTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHS
TTRPGSIYRFASHGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVKLAVTEEGRVFLEVHHDAYGRGVELHALARQLIERRN
IADLVDWNKVESVVKRREGLAEDVSL
>Mature_345_residues
AERYYLLCIQKSRVLFSSLAERGQKNAPLPPPDQPPAQADDKQLSSPEPTGQAAAEADANRPAENDFIPDSTVSKHLVGR
TSLYTVRKHDTLRLISSKLGVSQQHLIRMNRLASATTVKPGQKLKYNNRKIIPRRMSHGIVINIPDRTLYYFKEGKLTTS
LPVALGQPQKGATYDWMTPTGKFRVVAKQTDPTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHST
TRPGSIYRFASHGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVKLAVTEEGRVFLEVHHDAYGRGVELHALARQLIERRNI
ADLVDWNKVESVVKRREGLAEDVSL

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=225, Percent_Identity=32.4444444444444, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788299, Length=283, Percent_Identity=30.3886925795053, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787040, Length=235, Percent_Identity=31.4893617021277, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787356, Length=226, Percent_Identity=31.4159292035398, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 38911; Mature: 38780

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERYYLLCIQKSRVLFSSLAERGQKNAPLPPPDQPPAQADDKQLSSPEPTGQAAAEADA
CCCEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
NRPAENDFIPDSTVSKHLVGRTSLYTVRKHDTLRLISSKLGVSQQHLIRMNRLASATTVK
CCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
PGQKLKYNNRKIIPRRMSHGIVINIPDRTLYYFKEGKLTTSLPVALGQPQKGATYDWMTP
CCCCEECCCCEECCHHCCCCEEEECCCCEEEEEECCCEEEECCEEECCCCCCCEECCCCC
TGKFRVVAKQTDPTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHS
CCCEEEEEECCCCCEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEHHCCCCEEEEEC
TTRPGSIYRFASHGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVKLAVTEEGRVFLEVHHD
CCCCCCEEEECCCCEEEECHHHHHHHHHHCCCCCCHHHEEECEEEEEECCCEEEEEEECC
AYGRGVELHALARQLIERRNIADLVDWNKVESVVKRREGLAEDVSL
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
AERYYLLCIQKSRVLFSSLAERGQKNAPLPPPDQPPAQADDKQLSSPEPTGQAAAEADA
CCEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
NRPAENDFIPDSTVSKHLVGRTSLYTVRKHDTLRLISSKLGVSQQHLIRMNRLASATTVK
CCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
PGQKLKYNNRKIIPRRMSHGIVINIPDRTLYYFKEGKLTTSLPVALGQPQKGATYDWMTP
CCCCEECCCCEECCHHCCCCEEEECCCCEEEEEECCCEEEECCEEECCCCCCCEECCCCC
TGKFRVVAKQTDPTWYVPRSIRSEMEARGKDVKTVVPPGPRNPLGKYAIKTSLPGILIHS
CCCEEEEEECCCCCEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEHHCCCCEEEEEC
TTRPGSIYRFASHGCIRVYPEQMKDFFNEVRVNTPGEIIYQPVKLAVTEEGRVFLEVHHD
CCCCCCEEEECCCCEEEECHHHHHHHHHHCCCCCCHHHEEECEEEEEECCCEEEEEEECC
AYGRGVELHALARQLIERRNIADLVDWNKVESVVKRREGLAEDVSL
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]