| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is resE [H]
Identifier: 118581557
GI number: 118581557
Start: 3462440
End: 3464203
Strand: Direct
Name: resE [H]
Synonym: Ppro_3156
Alternate gene names: 118581557
Gene position: 3462440-3464203 (Clockwise)
Preceding gene: 118581556
Following gene: 118581558
Centisome position: 86.39
GC content: 63.66
Gene sequence:
>1764_bases ATGACATTCCGCTGGAAACTGATGCTTTCCTACCTGCTGCTGATTCTCTTGCTGTCCGGCTCCTATTACCTGAGTTTCGA TCACAGCGCCCAGAGCTACTTTCTGGACGAGAGCCGCGAGAACCTGATCAGCCAGACCAGACTGGCCAAGCTGCTGGCCG AGCAGGAGAGGGATACGATGCCGCCCCAACAGCTGGCCGAGAGGATCGGCTCCGCCATCAAGGCCCGCGTCACCCTGATC GACCGCTCGGGCCTGGTCAGGGGCGACTCCGATGTCAGCAAGGTCGAACTATCCCATCTGGAAAACCACCTCAAACGTCC GGAAGTCGTCCAGGCCATGCAGGGTGGGATCGGCAGCAGCCTGCGCTATTCCGAGACCCTGAAGACCGACATGCTCTACA CGGCCCTTGGTTACGAGAGCAACGGCCACTACGGCTTCATCAGACTGTCGCTCCCCCTGGAGCGCCTCTCCAGCGCCACG GCCGCCCTGCACCGCATGACCGCAGGCTCCGTGGGCATGGCGCTCCTGGCCGCCCTGGCCTTCAGCCTGCTCCTCTCCCG CGTCACCTCCCGCCCTTTGCGCGAAATGGCGGAGGTGGCCGCCCGCATCGGCAGAGATGGCGAGTACAGCCGCATCCCGG TCGCCTCCCAGGACGAGATCGGCGCCCTGGCCTCGGTCCTGAACGACATGGCCGAGCGCATCGACGCTCAGATGCACGGG TTGGACGCGGAAAAGACCCGGCTGGACGCGATCCTGCGCGGCATGGGCGAGGGGGTCATGGTGGCCAGCGCTGACGGTGC CATCACCCTGGTCAATCCCGCCTTCAGGAAGATGTTCGCCATGACGGACGGGGTAGAGGGGAAAAAGCTGATCGAGGTAT GCCGCAACCCCGACCTGCAGGCTGCCTTCCATGACCTGGCTCGTTGCGGGGGAGAGCTGAGCCGTGAGATCCGCATCCAG CCGGGTGATGTCACGCTGCTGACCCATTGGGTGCCCCTGGCCATGGATGGCGCCGGCCAGGGGGTCGTGGCGGTGTTTCA CGACATTACCGACATGAAACACGTGGAGGAGATGCGCCGCGACTTCGTGGCCAACGTATCCCATGAGCTACGCACCCCGG TCTCGGTCATCAAGGGATATGCCGAAACCCTCATGCAGAATGACATGCTCGTCTCCGAACCGGAGCACGCCACCCGCTTC GTGGAGATCATCCGCAGGCATGCCGAACGGTTGACCACCCTGATCAACGACATCCTGACCCTCTCCTGCCTGGAGGCCAG GAACAGCGCCCTGGAGCTCAACGCCATGGATGTGGGCACGACCATCGCCAAATCCTGCGCCCTGCTCGCCCCCCGGGCAG CGGAAAAGAAGATTTGCCTCCATAACGAAGTTGGCAACAATCTTCCCCGGACACTTGTCGACCAGGGTCGGCTGGAGCAG GTGCTGGTGAACCTGATCGACAACGCCGTCAAGTACACTCCCGAGGGGGGCACGATCCGCCTGTTTGCGGAACAGGGAGA AACGTTCCTCAGAATCTCCGTGCAGGACAGTGGCATCGGCATCCCGCCCAGGGACCTCCCCCGCATCTTCGAGCGCTTCT ACCGCGTGGATGAGGGACGCAGCCGCGAGCAGGGGGGCACCGGCCTGGGGCTCGCCATCGCCAAGCACATCGTCCAACTC CACGGCGGCGAACTGACGGTCACGAGCACTCCGGGCAAGGGCTCGACCTTCTCCTTCACCCTGCGCATGGCCACAAACAG CTGA
Upstream 100 bases:
>100_bases GATACGCACATCACCCGACTGCGCGGCAAGCTGGGCGCTCCGGGAGAGCAGATCAAGACGGTTCGGGGTTTCGGCTACAA AATCGAGGAGAACTAGTCCC
Downstream 100 bases:
>100_bases GTTTTCACACACTGTTTCCCCTTCTGTGACAGAATCGTAACAGTGCCGTGCTAGGGTAACAACCATTGAAAAGCACCACC CACATCTCAGGAGGATTCCA
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTFRWKLMLSYLLLILLLSGSYYLSFDHSAQSYFLDESRENLISQTRLAKLLAEQERDTMPPQQLAERIGSAIKARVTLI DRSGLVRGDSDVSKVELSHLENHLKRPEVVQAMQGGIGSSLRYSETLKTDMLYTALGYESNGHYGFIRLSLPLERLSSAT AALHRMTAGSVGMALLAALAFSLLLSRVTSRPLREMAEVAARIGRDGEYSRIPVASQDEIGALASVLNDMAERIDAQMHG LDAEKTRLDAILRGMGEGVMVASADGAITLVNPAFRKMFAMTDGVEGKKLIEVCRNPDLQAAFHDLARCGGELSREIRIQ PGDVTLLTHWVPLAMDGAGQGVVAVFHDITDMKHVEEMRRDFVANVSHELRTPVSVIKGYAETLMQNDMLVSEPEHATRF VEIIRRHAERLTTLINDILTLSCLEARNSALELNAMDVGTTIAKSCALLAPRAAEKKICLHNEVGNNLPRTLVDQGRLEQ VLVNLIDNAVKYTPEGGTIRLFAEQGETFLRISVQDSGIGIPPRDLPRIFERFYRVDEGRSREQGGTGLGLAIAKHIVQL HGGELTVTSTPGKGSTFSFTLRMATNS
Sequences:
>Translated_587_residues MTFRWKLMLSYLLLILLLSGSYYLSFDHSAQSYFLDESRENLISQTRLAKLLAEQERDTMPPQQLAERIGSAIKARVTLI DRSGLVRGDSDVSKVELSHLENHLKRPEVVQAMQGGIGSSLRYSETLKTDMLYTALGYESNGHYGFIRLSLPLERLSSAT AALHRMTAGSVGMALLAALAFSLLLSRVTSRPLREMAEVAARIGRDGEYSRIPVASQDEIGALASVLNDMAERIDAQMHG LDAEKTRLDAILRGMGEGVMVASADGAITLVNPAFRKMFAMTDGVEGKKLIEVCRNPDLQAAFHDLARCGGELSREIRIQ PGDVTLLTHWVPLAMDGAGQGVVAVFHDITDMKHVEEMRRDFVANVSHELRTPVSVIKGYAETLMQNDMLVSEPEHATRF VEIIRRHAERLTTLINDILTLSCLEARNSALELNAMDVGTTIAKSCALLAPRAAEKKICLHNEVGNNLPRTLVDQGRLEQ VLVNLIDNAVKYTPEGGTIRLFAEQGETFLRISVQDSGIGIPPRDLPRIFERFYRVDEGRSREQGGTGLGLAIAKHIVQL HGGELTVTSTPGKGSTFSFTLRMATNS >Mature_586_residues TFRWKLMLSYLLLILLLSGSYYLSFDHSAQSYFLDESRENLISQTRLAKLLAEQERDTMPPQQLAERIGSAIKARVTLID RSGLVRGDSDVSKVELSHLENHLKRPEVVQAMQGGIGSSLRYSETLKTDMLYTALGYESNGHYGFIRLSLPLERLSSATA ALHRMTAGSVGMALLAALAFSLLLSRVTSRPLREMAEVAARIGRDGEYSRIPVASQDEIGALASVLNDMAERIDAQMHGL DAEKTRLDAILRGMGEGVMVASADGAITLVNPAFRKMFAMTDGVEGKKLIEVCRNPDLQAAFHDLARCGGELSREIRIQP GDVTLLTHWVPLAMDGAGQGVVAVFHDITDMKHVEEMRRDFVANVSHELRTPVSVIKGYAETLMQNDMLVSEPEHATRFV EIIRRHAERLTTLINDILTLSCLEARNSALELNAMDVGTTIAKSCALLAPRAAEKKICLHNEVGNNLPRTLVDQGRLEQV LVNLIDNAVKYTPEGGTIRLFAEQGETFLRISVQDSGIGIPPRDLPRIFERFYRVDEGRSREQGGTGLGLAIAKHIVQLH GGELTVTSTPGKGSTFSFTLRMATNS
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=337, Percent_Identity=32.6409495548961, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1789149, Length=235, Percent_Identity=35.7446808510638, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI48994928, Length=255, Percent_Identity=36.078431372549, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI87081816, Length=229, Percent_Identity=36.6812227074236, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI145693157, Length=218, Percent_Identity=33.9449541284404, Blast_Score=122, Evalue=8e-29, Organism=Escherichia coli, GI1788393, Length=264, Percent_Identity=29.9242424242424, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=33.7606837606838, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI1790861, Length=220, Percent_Identity=35.4545454545455, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1786783, Length=262, Percent_Identity=29.7709923664122, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788713, Length=278, Percent_Identity=28.7769784172662, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786912, Length=235, Percent_Identity=33.1914893617021, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1788549, Length=383, Percent_Identity=26.1096605744125, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790346, Length=227, Percent_Identity=29.5154185022026, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI1788279, Length=266, Percent_Identity=27.8195488721804, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=27.6315789473684, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1790300, Length=242, Percent_Identity=28.9256198347107, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082128, Length=258, Percent_Identity=27.5193798449612, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1789403, Length=203, Percent_Identity=28.0788177339901, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64593; Mature: 64462
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRWKLMLSYLLLILLLSGSYYLSFDHSAQSYFLDESRENLISQTRLAKLLAEQERDTM CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPQQLAERIGSAIKARVTLIDRSGLVRGDSDVSKVELSHLENHLKRPEVVQAMQGGIGSS CHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCC LRYSETLKTDMLYTALGYESNGHYGFIRLSLPLERLSSATAALHRMTAGSVGMALLAALA CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHH FSLLLSRVTSRPLREMAEVAARIGRDGEYSRIPVASQDEIGALASVLNDMAERIDAQMHG HHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LDAEKTRLDAILRGMGEGVMVASADGAITLVNPAFRKMFAMTDGVEGKKLIEVCRNPDLQ CCHHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHHHHCCCCCHHHHHHHHCCCCHH AAFHDLARCGGELSREIRIQPGDVTLLTHWVPLAMDGAGQGVVAVFHDITDMKHVEEMRR HHHHHHHHHCHHHCCEEEECCCCEEEEEEHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH DFVANVSHELRTPVSVIKGYAETLMQNDMLVSEPEHATRFVEIIRRHAERLTTLINDILT HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSCLEARNSALELNAMDVGTTIAKSCALLAPRAAEKKICLHNEVGNNLPRTLVDQGRLEQ HHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCHHHHCCHHHHH VLVNLIDNAVKYTPEGGTIRLFAEQGETFLRISVQDSGIGIPPRDLPRIFERFYRVDEGR HHHHHHHHHHEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC SREQGGTGLGLAIAKHIVQLHGGELTVTSTPGKGSTFSFTLRMATNS CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEECCC >Mature Secondary Structure TFRWKLMLSYLLLILLLSGSYYLSFDHSAQSYFLDESRENLISQTRLAKLLAEQERDTM CCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPQQLAERIGSAIKARVTLIDRSGLVRGDSDVSKVELSHLENHLKRPEVVQAMQGGIGSS CHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCC LRYSETLKTDMLYTALGYESNGHYGFIRLSLPLERLSSATAALHRMTAGSVGMALLAALA CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHH FSLLLSRVTSRPLREMAEVAARIGRDGEYSRIPVASQDEIGALASVLNDMAERIDAQMHG HHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LDAEKTRLDAILRGMGEGVMVASADGAITLVNPAFRKMFAMTDGVEGKKLIEVCRNPDLQ CCHHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHHHHCCCCCHHHHHHHHCCCCHH AAFHDLARCGGELSREIRIQPGDVTLLTHWVPLAMDGAGQGVVAVFHDITDMKHVEEMRR HHHHHHHHHCHHHCCEEEECCCCEEEEEEHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH DFVANVSHELRTPVSVIKGYAETLMQNDMLVSEPEHATRFVEIIRRHAERLTTLINDILT HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSCLEARNSALELNAMDVGTTIAKSCALLAPRAAEKKICLHNEVGNNLPRTLVDQGRLEQ HHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCHHHHCCHHHHH VLVNLIDNAVKYTPEGGTIRLFAEQGETFLRISVQDSGIGIPPRDLPRIFERFYRVDEGR HHHHHHHHHHEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC SREQGGTGLGLAIAKHIVQLHGGELTVTSTPGKGSTFSFTLRMATNS CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]