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The map label for this gene is ygdH [C]

Identifier: 118581467

GI number: 118581467

Start: 3353209

End: 3354237

Strand: Reverse

Name: ygdH [C]

Synonym: Ppro_3064

Alternate gene names: 118581467

Gene position: 3354237-3353209 (Counterclockwise)

Preceding gene: 118581471

Following gene: 118581466

Centisome position: 83.69

GC content: 59.09

Gene sequence:

>1029_bases
ATGGAACTCAGTTTTTCCCGGGCAAACGCCGATGTCGACCAGATCATCAGTCATCTGTTGGAAGTGTCGGGTGATATTCG
CCAGCCGGCGCTGATCCGCGAGATGCTGCTGGCGGTGCTCAAGGTGGGGCAGGAGGTTGATTACCTGGCTGATCTGAAGC
TGATCAACCGCACCCTGCGCGAGATGCGCTTCACCACCAAGGTGTTTGGCCCCTATCGCGACCGGAAGAAGGTCACCATA
TTCGGCTCGGCCCGCACCGAACCGGATAACGAGATGTACCGGAAATGCGTCGATTTCAGCCGGAAGCTGGCTGAGCGGGG
CTACATGATCATCACCGGCGGCGGTCCCGGAATCATGCAGGCCGGCAACGAGGGGGCCGGCAGCGAGAACTCCTTTGCCG
TCAACATCCGGCTCCCCTTTGAACAGGCGCCCAACCCGATCATGTACCGCAACAAGCGCCTGATAACCTACAAGTACTTC
TTCAACCGCAAGGTGGCCTTCGTCAAGGAGGCCAACGCCATGGCCGTCTTTCCCGGGGGGTTCGGCACCCTGGACGAGGC
CATGGAGGTGTTCACCCTCATCCAGACCGGAAAGACGTCGCCGAAGCCGCTGATTCTCATTGACGATCAGGACGGCTACT
GGGAGCAGTTCTTCGACTTCGTCAAGGAGAGCCTGCTGGTGAAGGGCTTCATCTCCGGTGAGGACTTCTCCATCTTTACC
ATCACCAAGAGCGTGGATGAGGCGGTGGCGGTGATCGAGAACTTCTACCGTACCTTCCATTCCCTGCGCTTCATCGATAA
CCGGCTTGTCATCCGCCTGAACAAGCCCCTTGCCCCCGAACAGATCGCCATTCTGGAGGACGAGTTTTCCGAACTGGTCA
GGGAGGGGGATCGTATCCGCTGCTGCGGCCTGTTCCCGGAGGAGAACGATGAGCCGGACCTGGCGAACCTGCCGCGCATC
TCCCTGCTCTTCGACCACCACCACTACGGGTTGCTGCTGGCCTTTATCCACCGCATCAATACGTTCTAA

Upstream 100 bases:

>100_bases
TGTTTGGATGCGGTTTCCCCGTCCTGCCGGTTTGCATTGTACTCCCTGCTGTGCTAGTGTGCGGCCTCAATCCAAGGGTG
GGTACGAAGGGGCATGAACA

Downstream 100 bases:

>100_bases
ATGCGCTGCTGGCTGGAAGAGGCAGCCAGGCCGCCCGCTAGCCGCGCAAGCCGCATTGAGTTTTGACTTTTTGCGCCTCC
CGTGCTAGAAATATCCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MELSFSRANADVDQIISHLLEVSGDIRQPALIREMLLAVLKVGQEVDYLADLKLINRTLREMRFTTKVFGPYRDRKKVTI
FGSARTEPDNEMYRKCVDFSRKLAERGYMIITGGGPGIMQAGNEGAGSENSFAVNIRLPFEQAPNPIMYRNKRLITYKYF
FNRKVAFVKEANAMAVFPGGFGTLDEAMEVFTLIQTGKTSPKPLILIDDQDGYWEQFFDFVKESLLVKGFISGEDFSIFT
ITKSVDEAVAVIENFYRTFHSLRFIDNRLVIRLNKPLAPEQIAILEDEFSELVREGDRIRCCGLFPEENDEPDLANLPRI
SLLFDHHHYGLLLAFIHRINTF

Sequences:

>Translated_342_residues
MELSFSRANADVDQIISHLLEVSGDIRQPALIREMLLAVLKVGQEVDYLADLKLINRTLREMRFTTKVFGPYRDRKKVTI
FGSARTEPDNEMYRKCVDFSRKLAERGYMIITGGGPGIMQAGNEGAGSENSFAVNIRLPFEQAPNPIMYRNKRLITYKYF
FNRKVAFVKEANAMAVFPGGFGTLDEAMEVFTLIQTGKTSPKPLILIDDQDGYWEQFFDFVKESLLVKGFISGEDFSIFT
ITKSVDEAVAVIENFYRTFHSLRFIDNRLVIRLNKPLAPEQIAILEDEFSELVREGDRIRCCGLFPEENDEPDLANLPRI
SLLFDHHHYGLLLAFIHRINTF
>Mature_342_residues
MELSFSRANADVDQIISHLLEVSGDIRQPALIREMLLAVLKVGQEVDYLADLKLINRTLREMRFTTKVFGPYRDRKKVTI
FGSARTEPDNEMYRKCVDFSRKLAERGYMIITGGGPGIMQAGNEGAGSENSFAVNIRLPFEQAPNPIMYRNKRLITYKYF
FNRKVAFVKEANAMAVFPGGFGTLDEAMEVFTLIQTGKTSPKPLILIDDQDGYWEQFFDFVKESLLVKGFISGEDFSIFT
ITKSVDEAVAVIENFYRTFHSLRFIDNRLVIRLNKPLAPEQIAILEDEFSELVREGDRIRCCGLFPEENDEPDLANLPRI
SLLFDHHHYGLLLAFIHRINTF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39160; Mature: 39160

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSFSRANADVDQIISHLLEVSGDIRQPALIREMLLAVLKVGQEVDYLADLKLINRTLR
CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EMRFTTKVFGPYRDRKKVTIFGSARTEPDNEMYRKCVDFSRKLAERGYMIITGGGPGIMQ
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
AGNEGAGSENSFAVNIRLPFEQAPNPIMYRNKRLITYKYFFNRKVAFVKEANAMAVFPGG
CCCCCCCCCCCEEEEEEECHHHCCCCCEECCCEEEEEEEECCCEEEEEECCCEEEEECCC
FGTLDEAMEVFTLIQTGKTSPKPLILIDDQDGYWEQFFDFVKESLLVKGFISGEDFSIFT
CCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCEEEEE
ITKSVDEAVAVIENFYRTFHSLRFIDNRLVIRLNKPLAPEQIAILEDEFSELVREGDRIR
EECHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE
CCGLFPEENDEPDLANLPRISLLFDHHHYGLLLAFIHRINTF
EEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELSFSRANADVDQIISHLLEVSGDIRQPALIREMLLAVLKVGQEVDYLADLKLINRTLR
CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EMRFTTKVFGPYRDRKKVTIFGSARTEPDNEMYRKCVDFSRKLAERGYMIITGGGPGIMQ
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
AGNEGAGSENSFAVNIRLPFEQAPNPIMYRNKRLITYKYFFNRKVAFVKEANAMAVFPGG
CCCCCCCCCCCEEEEEEECHHHCCCCCEECCCEEEEEEEECCCEEEEEECCCEEEEECCC
FGTLDEAMEVFTLIQTGKTSPKPLILIDDQDGYWEQFFDFVKESLLVKGFISGEDFSIFT
CCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCEEEEE
ITKSVDEAVAVIENFYRTFHSLRFIDNRLVIRLNKPLAPEQIAILEDEFSELVREGDRIR
EECHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE
CCGLFPEENDEPDLANLPRISLLFDHHHYGLLLAFIHRINTF
EEECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA