Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118581454

Identifier: 118581454

GI number: 118581454

Start: 3340224

End: 3340715

Strand: Reverse

Name: 118581454

Synonym: Ppro_3051

Alternate gene names: NA

Gene position: 3340715-3340224 (Counterclockwise)

Preceding gene: 118581455

Following gene: 118581453

Centisome position: 83.35

GC content: 50.0

Gene sequence:

>492_bases
ATGAATCTTCTAGACATCATTATCCTGCTGGTCCTGCTCTTCTTTGCTCTCAAGGGCCTGCTTCGCGGGCTTGTAAACGA
GGTGTCTTCCCTCGCCGGTCTCCTGCTGGGTGGATGGCTTGCATACCGATATTATCCAAACCTCTCTGTTCCCCTGAGGA
ACGTCCTCCACGTCCCGGAACATATCGCAGCATTTCTTTCATTTGTACTTCTCTTGATGCTCGTTGGATTCATTGCCCAC
ATTCTCGGTAACATTGTTACAACGGCACTCCATGTTGTCATGCTCGGCGGTCTCAACCGAGTGGGGGGCGGGGTACTAGG
AACGGCTGAAGGAGTTTTGCTGCTCAGTATGCTGTTCTGCATTGGTACGGCGGATTTTATGCCGATGAAACTGAAACAGA
AAATACAAATGACCGAATCAGCACATATGTTCGCACAAATTGGTGATAAACTTCTCTTTACGTGGCGCGGGAGGCCTGGA
GTCCAACGATGA

Upstream 100 bases:

>100_bases
TGTGCCATGATATTCGGTACATTTGTCCTGCTTACCTGAAATGGTGAAGGGGCCATCAATCTGATTGCCCCTTCTTTCGT
AGTCGTTTCAAGGTTCTGCG

Downstream 100 bases:

>100_bases
TTCCAGATCATAAAGTTCGCGAGGTAGTGGAGCGCGCTTCGATTGTCGAGGTCGTTTCCGAGTATGTCCCGTTGCGACGC
TCTGGCGCGAATTATCTTGG

Product: colicin V production protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPEHIAAFLSFVLLLMLVGFIAH
ILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFCIGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPG
VQR

Sequences:

>Translated_163_residues
MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPEHIAAFLSFVLLLMLVGFIAH
ILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFCIGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPG
VQR
>Mature_163_residues
MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPEHIAAFLSFVLLLMLVGFIAH
ILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFCIGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPG
VQR

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17839; Mature: 17839

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHH
HIAAFLSFVLLLMLVGFIAHILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH
IGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPGVQR
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
>Mature Secondary Structure
MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHH
HIAAFLSFVLLLMLVGFIAHILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH
IGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPGVQR
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA