| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581454
Identifier: 118581454
GI number: 118581454
Start: 3340224
End: 3340715
Strand: Reverse
Name: 118581454
Synonym: Ppro_3051
Alternate gene names: NA
Gene position: 3340715-3340224 (Counterclockwise)
Preceding gene: 118581455
Following gene: 118581453
Centisome position: 83.35
GC content: 50.0
Gene sequence:
>492_bases ATGAATCTTCTAGACATCATTATCCTGCTGGTCCTGCTCTTCTTTGCTCTCAAGGGCCTGCTTCGCGGGCTTGTAAACGA GGTGTCTTCCCTCGCCGGTCTCCTGCTGGGTGGATGGCTTGCATACCGATATTATCCAAACCTCTCTGTTCCCCTGAGGA ACGTCCTCCACGTCCCGGAACATATCGCAGCATTTCTTTCATTTGTACTTCTCTTGATGCTCGTTGGATTCATTGCCCAC ATTCTCGGTAACATTGTTACAACGGCACTCCATGTTGTCATGCTCGGCGGTCTCAACCGAGTGGGGGGCGGGGTACTAGG AACGGCTGAAGGAGTTTTGCTGCTCAGTATGCTGTTCTGCATTGGTACGGCGGATTTTATGCCGATGAAACTGAAACAGA AAATACAAATGACCGAATCAGCACATATGTTCGCACAAATTGGTGATAAACTTCTCTTTACGTGGCGCGGGAGGCCTGGA GTCCAACGATGA
Upstream 100 bases:
>100_bases TGTGCCATGATATTCGGTACATTTGTCCTGCTTACCTGAAATGGTGAAGGGGCCATCAATCTGATTGCCCCTTCTTTCGT AGTCGTTTCAAGGTTCTGCG
Downstream 100 bases:
>100_bases TTCCAGATCATAAAGTTCGCGAGGTAGTGGAGCGCGCTTCGATTGTCGAGGTCGTTTCCGAGTATGTCCCGTTGCGACGC TCTGGCGCGAATTATCTTGG
Product: colicin V production protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPEHIAAFLSFVLLLMLVGFIAH ILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFCIGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPG VQR
Sequences:
>Translated_163_residues MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPEHIAAFLSFVLLLMLVGFIAH ILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFCIGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPG VQR >Mature_163_residues MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPEHIAAFLSFVLLLMLVGFIAH ILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFCIGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPG VQR
Specific function: Unknown
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17839; Mature: 17839
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHH HIAAFLSFVLLLMLVGFIAHILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH IGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPGVQR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC >Mature Secondary Structure MNLLDIIILLVLLFFALKGLLRGLVNEVSSLAGLLLGGWLAYRYYPNLSVPLRNVLHVPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHH HIAAFLSFVLLLMLVGFIAHILGNIVTTALHVVMLGGLNRVGGGVLGTAEGVLLLSMLFC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH IGTADFMPMKLKQKIQMTESAHMFAQIGDKLLFTWRGRPGVQR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA